Aeromicrobium sp. A1-2: C6I20_06040
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Entry
C6I20_06040 CDS
T05642
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
aeb
Aeromicrobium sp. A1-2
Pathway
aeb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aeb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C6I20_06040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aeb03021
]
C6I20_06040
Transcription machinery [BR:
aeb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C6I20_06040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4
FBF1
Motif
Other DBs
NCBI-ProteinID:
AXT84796
LinkDB
All DBs
Position
complement(1237312..1238262)
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AA seq
316 aa
AA seq
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MVSARNGSTNIEGKDSVGMYLAEIARTPLLDAEREVELSKSVEAGLFARHLLAEGRIGRR
KGGAPKSATEEELTWLAEEGDQAVQEFIQANLRLVVSIARKYGRSAMPMLDLVQEGNTGL
IRAVEKFDYVKGFKFSTYATWWVRQAITRGIAQQARVVRLPVHVVEELNQVTAARRNLER
QLGYDPEPAEIGLELGMDVDRVIDLMAWGRDHVSLDSPVDEDGDTSLGDLIARETLPGPD
LAVIDDESRHLISNLVDNLGEREADIVRARYGLLDGRQQKLADIGKRHGISAERVRQLER
EALATLRRIADPDLAA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcgcacgaaacggcagcaccaacatcgaaggcaaggacagcgtcggcatgtac
ttggccgagattgcccgcactcccctgctcgacgccgagcgagaggtcgagctgagcaag
tccgtggaggctgggctgttcgcccggcacctcctcgcggaaggccggatcggccgtcgc
aagggcggagcgccgaagtcggccaccgaggaggagctcacgtggctcgccgaggagggc
gaccaggcggtccaggagttcatccaggccaacctgcgactcgtggtctcgatcgcccgc
aagtacggtcgctcggccatgccgatgctcgacctggtccaggagggcaacacgggcctg
atccgcgccgtcgagaagtttgactacgtcaagggcttcaagttctccacgtacgccacc
tggtgggtgcgtcaggcgatcacccgcggcatcgcgcagcaggccagggtcgtacgcctc
ccggtccacgtcgtcgaggagctcaaccaggtgacggccgcgcgccgcaatctggagcgg
cagctgggttacgacccggagccggccgagatcggcctggagctcgggatggacgtcgac
cgggtcatcgatctgatggcgtggggacgcgaccacgtcagtctcgactcccccgtcgac
gaggacggcgacacctcgctgggtgacctgatcgcccgcgagacgctgccgggcccggac
ctcgcagtgatcgacgacgagtcacggcacctgatctcgaacctcgtcgacaacctcggt
gagcgcgaggccgacatcgtgcgcgcccgctacgggctgctcgacggtcgtcagcagaag
cttgctgacatcggcaagcggcacggcatctcggcggagcgcgttcgccagctggaacgc
gaggcgctggccaccctgcgccgcatcgcggatccggacctggctgcctag
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