Aeromicrobium sp. A1-2: C6I20_06065
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Entry
C6I20_06065 CDS
T05642
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
aeb
Aeromicrobium sp. A1-2
Pathway
aeb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aeb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C6I20_06065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aeb03021
]
C6I20_06065
Transcription machinery [BR:
aeb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C6I20_06065
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AXT86779
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Position
1244502..1245845
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AA seq
447 aa
AA seq
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MAAATKDDPAAPSKASAAKASTPSSSPAKTEATVTNTASGTTKKTPAKKAPAAKKAPAKK
AAPKKGAESQEGSNIPANIDIAKVLEVPAVQVDAQGKKTLPDIPDEEFEKDLATDPTLKE
DEKSSYTISAADESDEPVQQVMVAGATADPVKDYLKQIGKVSLLTAGQEVELAKRIEAGL
FAEEKLAKGGRISPKMLEELEWITVDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLI
QEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLAR
VQRQMLQDLGREPTPEELAIELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIED
SEAIVPADAVSFTLLQEQLHAVLDTLSERESGVVSMRFGLTDGQPKTLDEIGKVYGVTRE
RIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttggcggcagcaacaaaggatgatcctgcagcacccagcaaggcttcggccgccaaggcc
agcacaccgtccagttccccggcgaagacagaagcgacagtgaccaacaccgcatcaggc
acgaccaagaagacccccgccaagaaggctccggctgcgaagaaggccccggccaagaag
gcagcgcccaagaagggcgctgagagccaggaggggtcgaacatcccagcgaacatcgac
atcgccaaggtccttgaggtcccggccgtgcaggtcgacgcgcagggcaagaagaccctt
ccggacattcccgacgaggagttcgagaaggacctggcgacggacccgacgctcaaggag
gacgagaagtcgtcctacacgatctcggcggccgacgagagcgacgagccggtccagcag
gtcatggtggcgggcgccaccgccgacccggtcaaggactacctcaagcagatcggcaag
gtctcgctgctgaccgccggtcaggaggtcgagctggccaagcgcatcgaggccgggctg
tttgccgaggagaagctcgccaagggcggtcgtatctcgccgaagatgctcgaagagctc
gagtggatcacggtcgacggccgtcgggccaagaaccacctgctcgaggccaacctgcgc
ctcgtggtctcgctggccaagcgctacacgggtcgcggcatgttgttcctggacctgatc
caggagggcaacctcggtctgatccgcgcggtcgagaagttcgactacaccaagggcttc
aagttctcgacctacgcgacgtggtggatccgccaggcgatcacccgtgcgatggccgac
caggcccgcacgatccgcatcccggtccacatggtcgaggtcatcaacaagctggcccgc
gtgcagcgccagatgctgcaggacctgggccgcgagcccacgcccgaagagctcgcgatc
gagctcgacatgactccggaaaaggtcgtcgaggtccagaagtacggccgcgagccgatc
agcctgcacacgcccctgggcgaggacggcgactccgagttcggcgacctgatcgaggac
tcggaggccatcgtcccggccgacgcggtctccttcacactcctgcaggagcagcttcac
gcggtgctcgacacactctccgagcgtgagtccggcgtcgtctcgatgcgttttggcctg
accgatggacagcccaagacgcttgacgagatcggcaaggtctacggcgtcacgcgcgag
cggatccgtcagatcgagtccaagaccatgagcaagctgcggcacccgtcgcgctcgcag
gttctgcgcgactacctcgactga
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