KEGG   Aeromicrobium sp. A1-2: C6I20_06065
Entry
C6I20_06065       CDS       T05642                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
aeb  Aeromicrobium sp. A1-2
Pathway
aeb02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:aeb00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    C6I20_06065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aeb03021]
    C6I20_06065
Transcription machinery [BR:aeb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C6I20_06065
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AXT86779
LinkDB
Position
1244502..1245845
AA seq 447 aa
MAAATKDDPAAPSKASAAKASTPSSSPAKTEATVTNTASGTTKKTPAKKAPAAKKAPAKK
AAPKKGAESQEGSNIPANIDIAKVLEVPAVQVDAQGKKTLPDIPDEEFEKDLATDPTLKE
DEKSSYTISAADESDEPVQQVMVAGATADPVKDYLKQIGKVSLLTAGQEVELAKRIEAGL
FAEEKLAKGGRISPKMLEELEWITVDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLI
QEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLAR
VQRQMLQDLGREPTPEELAIELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIED
SEAIVPADAVSFTLLQEQLHAVLDTLSERESGVVSMRFGLTDGQPKTLDEIGKVYGVTRE
RIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1344 nt   +upstreamnt  +downstreamnt
ttggcggcagcaacaaaggatgatcctgcagcacccagcaaggcttcggccgccaaggcc
agcacaccgtccagttccccggcgaagacagaagcgacagtgaccaacaccgcatcaggc
acgaccaagaagacccccgccaagaaggctccggctgcgaagaaggccccggccaagaag
gcagcgcccaagaagggcgctgagagccaggaggggtcgaacatcccagcgaacatcgac
atcgccaaggtccttgaggtcccggccgtgcaggtcgacgcgcagggcaagaagaccctt
ccggacattcccgacgaggagttcgagaaggacctggcgacggacccgacgctcaaggag
gacgagaagtcgtcctacacgatctcggcggccgacgagagcgacgagccggtccagcag
gtcatggtggcgggcgccaccgccgacccggtcaaggactacctcaagcagatcggcaag
gtctcgctgctgaccgccggtcaggaggtcgagctggccaagcgcatcgaggccgggctg
tttgccgaggagaagctcgccaagggcggtcgtatctcgccgaagatgctcgaagagctc
gagtggatcacggtcgacggccgtcgggccaagaaccacctgctcgaggccaacctgcgc
ctcgtggtctcgctggccaagcgctacacgggtcgcggcatgttgttcctggacctgatc
caggagggcaacctcggtctgatccgcgcggtcgagaagttcgactacaccaagggcttc
aagttctcgacctacgcgacgtggtggatccgccaggcgatcacccgtgcgatggccgac
caggcccgcacgatccgcatcccggtccacatggtcgaggtcatcaacaagctggcccgc
gtgcagcgccagatgctgcaggacctgggccgcgagcccacgcccgaagagctcgcgatc
gagctcgacatgactccggaaaaggtcgtcgaggtccagaagtacggccgcgagccgatc
agcctgcacacgcccctgggcgaggacggcgactccgagttcggcgacctgatcgaggac
tcggaggccatcgtcccggccgacgcggtctccttcacactcctgcaggagcagcttcac
gcggtgctcgacacactctccgagcgtgagtccggcgtcgtctcgatgcgttttggcctg
accgatggacagcccaagacgcttgacgagatcggcaaggtctacggcgtcacgcgcgag
cggatccgtcagatcgagtccaagaccatgagcaagctgcggcacccgtcgcgctcgcag
gttctgcgcgactacctcgactga

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