Aeromicrobium sp. A1-2: C6I20_07900
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Entry
C6I20_07900 CDS
T05642
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aeb
Aeromicrobium sp. A1-2
Pathway
aeb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aeb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C6I20_07900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aeb03400
]
C6I20_07900
Enzymes [BR:
aeb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C6I20_07900
DNA repair and recombination proteins [BR:
aeb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C6I20_07900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
Thioesterase
Motif
Other DBs
NCBI-ProteinID:
AXT85111
UniProt:
A0A3B7D5K3
LinkDB
All DBs
Position
complement(1623640..1626933)
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AA seq
1097 aa
AA seq
DB search
MRAFGIRDPLPTGTTLLEASAGTGKTWTVGALVTRYVAEGVASLDELLIITFGRAASREL
RERVREQLVEAERELADPAAAAGHRNELIVLLAEGDAAVVAQRRERLRAALADFDGATIA
TTHQFCQLVLRSLGTAGDADAGEELVESLDEVVVEIVHDLYLARYRLDDPPFTIDDALAL
ARRAVGDPQAQLLPDDADPGSPAGVRVGFALAVRDELDRRKRALGLLGYDDLLSRLAVAL
EGDDAPARDQMRRRWQVVLVDEFQDTDPVQWQVLERAFGGHAALILIGDPKQAIYAFRGG
DVVTYLEAAATAGEQATLATNWRSDAPLVESLLVPFGGAALGDPRIVVHPVGADHAGSRL
AGPAPMPPFRLRVLTRFDFGAAPGAKISAPRARERIADDLAADIAATLAGGTTFDHRPLA
AGDIAVLVYSHPHAALVQAALAGHGITAVLAGGTNVFRSAAGDAWLTLLEAMERPQSSPR
VRAAALTDFFGHSATELASSGDALTDAVATRVRDLADLLRDRGIAAVFEATSGHGELARR
VLERPDGRRRMTDLRHVAQSLHEIAERDRLGPAALLAWLRSQRDDSADGAAERTRRLDSD
AAAVQVVTVHASKGLQYPIVYLPFLYDRWIPPEDVPRFHVGGDRVLDIGGRSAGSWRASE
TAAKLEDSGEQLRLLYVAATRAQSQVIAWWAPTTNANNAGLTRLLFGRRPGEATVPSSTP
APTDEEAVRILGEWQSLGGPVVERVLPRERLVVPDEPQTGDLAVRTFDRLVDASWRRTSY
TALTRVDDPSPTVGSEAPDIGTIDEDTEELTVAGETTVDVLSPMADLPTGAAFGSLVHGV
LEHLDVTTDDLREHLAELVRGELGYWGVDADPGDLADALVAVCRTPLGPLADDLTLETLL
ADRQLRELDFEIPLAGGDSPAARGSAGGEPHLGDLAPLLERHLDAGDPMRAFADRLRAPG
LAGQSLRGYLSGSIDLGLRLPDGRCLVVDYKTNWLGDFETPLTLDGYSATGLAAAMNSGT
YPLQALLYSVVMHRYLRWRQPGYDPQRHLGGILYLYVRGMAGPETPRADGQTYGVFAWRP
PAALIEALSDLLDGVAP
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
gtgagggcgttcggcatccgcgacccgttgcccaccgggacgaccctgctcgaggccagc
gccggcaccggcaagacgtggaccgtcggcgccctggtgacccggtacgtcgccgagggg
gtcgcgagcctcgacgagctgctgatcatcaccttcggccgcgcggccagccgcgagctg
cgcgaacgggtccgcgagcagctcgtcgaggccgagcgcgagctggccgaccctgcagcg
gccgcgggtcaccgcaacgagctgatcgtgctcctcgccgagggcgacgcggccgtcgtg
gcgcagcggcgcgaacgcctgcgcgcggcgttggcggacttcgacggagccacgatcgcg
acgacgcaccagttctgccagctcgtgctccgcagcctcggcaccgcgggcgacgccgac
gcgggcgaagagctcgtcgagagcctcgacgaggtcgtggtagagatcgtccacgacctc
tacctcgcgcgctaccggctcgacgacccgccgttcaccatcgacgacgcgctggcgctg
gcccgccgggcggtcggcgacccgcaggcccaactgctgcccgacgacgccgacccgggc
tctcccgccggtgtccgcgtcggcttcgccctggccgtccgcgacgagctcgaccggcgc
aaacgggctctgggtctgctgggatacgacgacctgctgagccggctggcagtcgccctg
gagggtgacgacgccccggcccgcgaccagatgcgccgccgctggcaggtcgtgctggtt
gatgagttccaggacaccgacccggtgcagtggcaggtcctggaacgagcgttcggtggc
cacgcagccctgatcctgatcggcgaccccaagcaggcgatctatgccttccgcggcggt
gacgtcgtgacctatctcgaggcggccgcgacggcgggggagcaggcgaccctggcgacc
aactggcgcagcgacgcacctctggtcgagtcgctgctggtcccgttcggaggggctgcg
ctgggcgacccacggatcgtcgtgcaccccgtcggtgccgatcacgccggttcacggctc
gccggccccgcaccgatgccgccgttccgcctgagggtgctgacccgcttcgacttcggc
gccgcaccgggcgccaagatcagcgccccgcgcgcccgtgagcggatcgccgacgacctg
gccgccgacatcgccgcgacgctcgcaggcggcacaaccttcgaccaccggccgctggcc
gccggtgacatcgcggtgctggtctactcccacccgcacgccgcgctggtccaggccgcg
ctcgccgggcacggcatcaccgccgtgctggcggggggcaccaacgtcttccgcagcgct
gccggcgacgcctggctgaccctgctggaggcgatggagcggccgcagagcagcccccgc
gtccgcgcggccgcgttgaccgacttcttcgggcactccgcgaccgagctggcctcgtcc
ggcgacgccctgaccgatgccgtcgcgacccgggtgcgtgatctggccgatctgctccgc
gaccgggggatcgccgcggtcttcgaggccacctcgggccacggcgagctcgcccgacgg
gtgctggagcggcccgacggtcggcgccggatgaccgacctgcggcacgtcgcgcagagc
ctgcacgagatcgccgagcgcgaccggctcggcccggccgcgctgctggcctggctgcgg
tcgcagcgcgacgactcggccgacggggccgccgaacgtacgcgccggctcgacagcgac
gccgccgcggtgcaggtcgtcacggtgcacgccagcaagggcctgcagtaccccatcgtc
tatctgccgttcctgtacgaccggtggatcccacccgaggacgtgccacgcttccacgtg
ggcggcgatcgcgtgctcgacatcggcggcaggagcgctggctcgtggcgggccagcgag
accgccgccaagctcgaggacagcggcgagcagctgcggttgctgtacgtcgcagcgacc
cgggcccagtcgcaggtcatcgcgtggtgggcgccgaccacgaacgccaacaacgcgggc
ctgacccggctgctgttcggccgccggcccggcgaggccaccgtgccgagctcgaccccc
gcgcccaccgacgaggaggccgtgcgcatcctcggcgagtggcagtcgctcggcggaccc
gtcgtggagcgggtgctcccgcgggagcgtctcgtggtgccggacgagccgcagaccggc
gatctcgccgtgcgcacgttcgaccggctcgtcgacgcgtcctggcggcgcacgtcgtac
accgcgttgacccgggtcgacgacccgtcaccgacggtcggcagcgaggcgcccgacatc
ggcacgatcgatgaggacaccgaggagctgaccgtcgcgggggagaccacggtcgacgtc
ctgtcgccgatggccgacctgcccaccggcgccgccttcggcagcctggtgcacggcgtg
ctggagcacctcgacgtcacgaccgacgacctgcgtgaacacctcgccgagctggtccgt
ggcgagctcggatactggggggtcgacgccgacccgggagacctggccgatgcgctcgtc
gcagtgtgccgcactcccttgggaccgctggccgacgacctgacgctggagacgctgctg
gcggaccggcagctgcgcgagctcgacttcgagatcccacttgccggtggcgacagcccc
gccgcccggggctcggcgggcggtgagccgcacctgggcgatctcgcaccgctgctggag
cgccacctcgacgccggcgacccaatgcgggcgttcgccgaccggctccgggcgccgggg
ctcgcgggccagtcgctgcgcggatatctgtccggctcgatcgacctggggctccggctc
ccggacggtcgctgcctggtcgtggactacaagaccaactggctcggcgacttcgagacc
cccctgacgctggacggttacagcgcgacgggactcgcggcggcgatgaactccggcacg
tacccgctgcaggctttgctctacagcgtcgtgatgcaccgctacctgcgctggcgccag
cccggctacgacccccagcgccatctcggcggcatcctctatctctacgtccgcggcatg
gccggtcctgagacgccacgtgcggacggtcagacgtacggcgtgttcgcctggcggccg
cccgctgcgctgatcgaggcgctgtcggacctgctggacggagtcgcaccatga
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