Aeromicrobium sp. A1-2: C6I20_12480
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Entry
C6I20_12480 CDS
T05642
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aeb
Aeromicrobium sp. A1-2
Brite
KEGG Orthology (KO) [BR:
aeb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aeb03032
]
C6I20_12480
03400 DNA repair and recombination proteins [BR:
aeb03400
]
C6I20_12480
Enzymes [BR:
aeb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C6I20_12480
DNA replication proteins [BR:
aeb03032
]
Prokaryotic type
DNA Topoisomerases
C6I20_12480
DNA repair and recombination proteins [BR:
aeb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C6I20_12480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
SOK
Motif
Other DBs
NCBI-ProteinID:
AXT85918
UniProt:
A0A3B7DJP7
LinkDB
All DBs
Position
2560287..2561282
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AA seq
331 aa
AA seq
DB search
MVRLRRTSPSTPGWERVRHGRGFRYLDQDRRPLEPEQVERCRLLVIPPAWNAVWICPLDN
GHLQAVGTDVAGRRQYIYHPDWRVRRDLAKYQRMEGFAAELLKHRTASRRDLGGDGLTLE
RFAATAFSLLDLGMFRIGSERYVEENGSYGLSTLEKRHVHGTGRGMTFSYPAKSGQDVEV
TVRDERVRDVLDTLHRRRGGGDRLLAYKSGRQWHDLAADDVNAYVKELLGDAYSAKDFRT
WRGTSIAALSLATSDRASAASRKKSVATAMREVSEHLGNTPAIARSSYVDPRVVDLYADG
VTVGSNHRRVAPGATISRTLERQVLRMLRRA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggtccgactccgccgtacgtctccgtcaacaccgggctgggagcgggtgcgtcacgga
cgaggcttccgctacctcgaccaggaccggcggccgctcgagccggagcaggtcgagcgc
tgccggctgctggtcatcccgcccgcgtggaacgcggtgtggatctgcccgctcgacaat
ggtcatctgcaagcggtcggcaccgacgtcgccggccggaggcagtacatctatcacccg
gactggcgagtgcggcgggacctggcgaagtaccaacggatggaagggttcgccgccgag
ctcctcaagcaccggaccgcatcacgtcgcgacctcggcggcgatgggctgacccttgag
cggttcgctgcgacggcattcagcctgctcgatctcggcatgttccgcatcggttcggag
cggtacgtcgaggagaacgggagctacggcctctcgacgctggagaagcggcacgtgcac
ggcacgggtcgcggcatgacgttctcctatcccgccaagtcgggccaggacgtcgaggtc
acggtccgggacgagcgggtgcgggacgtgctcgacacgctgcaccgccgccgggggggc
ggcgaccggctgctggcgtacaagtcggggcggcagtggcacgatctggctgccgacgac
gtcaacgcctacgtcaaggagctgctgggcgacgcgtactccgccaaggacttccgcacc
tggcgcggcacctcgatcgccgcgctctcgctcgcaaccagcgaccgggcctcagccgcg
agccgcaagaagtcggttgccacggcgatgcgtgaggtgtccgagcacctcgggaacacc
ccggcgatcgcccgatcctcctacgtcgacccccgagtcgtcgacctctacgccgacgga
gtcacggtcgggtccaaccaccgtcgagtggctcccggcgccacgatcagtcgcacgctg
gaacgtcaggtgctccgcatgctgcgccgcgcctag
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