Acromyrmex echinatior (Panamanian leafcutter ant): 105142942
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Entry
105142942 CDS
T03917
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03030
DNA replication
aec03410
Base excision repair
aec03420
Nucleotide excision repair
aec03430
Mismatch repair
aec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105142942
03410 Base excision repair
105142942
03420 Nucleotide excision repair
105142942
03430 Mismatch repair
105142942
03440 Homologous recombination
105142942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aec03032
]
105142942
03400 DNA repair and recombination proteins [BR:
aec03400
]
105142942
Enzymes [BR:
aec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105142942
DNA replication proteins [BR:
aec03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
105142942
DNA repair and recombination proteins [BR:
aec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
105142942
MMR (mismatch excision repair)
DNA polymerase delta complex
105142942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
DUF6356
Motif
Other DBs
NCBI-GeneID:
105142942
NCBI-ProteinID:
XP_011049161
LinkDB
All DBs
Position
Unknown
AA seq
1092 aa
AA seq
DB search
MSKVNRKPFSAPSAAKKPKFRDEDEEKPSSFETELATMDLADEDFLDETLLIGEGPEQEN
TSAKWSRAPPPSLNPKVDTLSFQQIEIDHYIGKPLPGMPGSKVGPVPIMRMFGVTEQGNS
VCCHVHGFCPYLFVSAPSNFTNDHCKPFKEALNQAVKKDMKSNPDNIQDAILAVELVYKQ
SMYGYGGNDKLPFLKITVAVPKLIAPCKRLLEQDTVYTAFNYHYRAFESNIDFDIRFMVD
TSVVGCSWIELPPGSWKLRGQYGHMLELITRCQLEVDVAWDAFVAHAPEGEWSKIAPFRI
LSFDIECAGREGIFPEAKHDPVIQIANMVIRQGESEPFLRNIFTLDTCAPIVGCQVLSFE
KESLMLEKWADFMRQLDPDIFTGYNINNFDFPYLINRAQHLNVKNFNFLGRIKNIKSVIK
DHVLQSKQLGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHFLQEQKEDVQHK
DITGLQNGNAQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVTGVSISSLLTRGQQ
IKVVSQLLRKTREKDYLMPVHQGHGTDEQFEGATVIEPKRGYYNDPIATLDFSSLYPSII
MAHNLCYTTLLTIAKKKELNIQEDQITTTPSKSLFIKNSVRKGILPEILENLLVARKKAK
TELKQETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISASVTAYGRTMIEQT
KQEVEDHFRIENGYKNDAMVIYGDTDSVMVKFGVKDIEDAMKLGKEAADYVTSKFIKPIK
LEFEKVYFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNCPLVANMMNTCLQILL
IERNPHAAVDYAKQVISDLLCNRIDLSQLVITKELTKTDYAAKQAHVELATKMKKRDAGN
APKLGDRVAYVFISAAKGTPAYQKAEDPVYALQNSIPIDTNYYLENQLAKPLVRIFEPIL
GDKAESLLLKGDHTRTRCIATSQVGALAAFTRKKETCLGCKAVLPPDREDKAVCKHCESQ
EAELFHNELQAQHKLEEKFSRLWAECQRCQGSLHQEVICSNRDCPIFYMRVKSRLDMDAK
IKRIKRFGALEW
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagtaaatcgaaaaccgttttcagcaccttcggcagcgaagaagcccaaattt
agagatgaagatgaagagaagcctagttcatttgagacagaactggccactatggatctt
gcagatgaagattttttagacgagacactattaattggagaaggacctgaacaagaaaat
acatctgcaaaatggagcagagctcctccaccgtctttgaatccaaaagttgatacactg
tcatttcaacaaattgaaattgatcattatataggtaaacctcttcctggaatgccaggt
agtaaagtaggacctgtaccaataatgagaatgtttggtgttacggaacaaggaaattct
gtctgttgccatgtccatggtttttgtccatatttgtttgtatcagcaccatcaaatttt
acaaacgatcactgcaagccattcaaagaggctcttaatcaagctgtaaagaaggatatg
aaatcaaatccagataacatacaagatgccattctagcagtcgagttagtctataaacaa
tcgatgtatggatatggaggaaacgataagttgccatttttgaaaattacagtggcagtc
ccaaaattgatagcaccttgtaaaagattattagaacaagacacagtgtatactgcattc
aattatcactatagagcgtttgaaagtaacatcgattttgatatcaggttcatggttgat
acgtcagtagttggctgttcttggattgaattaccaccaggaagctggaaattacgtggc
cagtatggacacatgttggaattaattacacgatgtcagttagaagtggatgttgcatgg
gatgcttttgtagctcatgcaccggaaggggaatggtcaaaaatagctccattcagaatt
cttagttttgatattgaatgcgctggacgcgaaggtatcttcccggaagcaaaacatgat
cctgtgatacaaattgctaacatggtcataagacaaggcgaatctgaaccatttttaaga
aatattttcactcttgatacttgcgcgcctatcgtcggttgccaagttctgagctttgaa
aaagaaagtttaatgttagaaaaatgggctgattttatgcgacaattagatcctgacatt
ttcacagggtataacataaataattttgactttccatacttaattaatcgtgcgcaacat
cttaatgttaaaaacttcaactttctcggacgaataaaaaatataaagtctgtaatcaaa
gatcatgtattgcaaagcaaacagctgggtcgtcgtgaaaacaaatcgattaattttgaa
ggaagagttccattcgatttattgctagtattggttcgagattataaactgaggtcttat
actttaaatgcggtatcataccattttcttcaagaacaaaaagaagatgtccagcataag
gatattacaggattacaaaacggaaatgcacagacacgtcgacgtcttgctgtatactgt
ttgaaggatgcatacttaccacttagattattagacaaattaatgtgtattattatctat
atggaaatggcaagagtaacaggagtgtccatttctagcttattgactcgcgggcaacaa
atcaaagttgtctctcaacttttacgtaagactagggaaaaagattatttgatgccagta
catcaaggccatggtaccgacgaacaattcgaaggagcgactgtcattgaacctaagcgt
ggctactacaatgatccaatagctaccttagatttcagttccttatatcctagcattatt
atggcacacaacttatgttacacgacattattaactattgctaaaaagaaggaactcaat
attcaggaggaccagattaccacaactcctagtaaatcattattcatcaagaatagtgta
aggaaaggaatccttcctgagattttggagaatctattggtagctagaaaaaaagcaaaa
acagagttaaaacaagaaacggatcctttgaagcaaaaagtactcgatggcagacaatac
gccttgaaagtatcggcgaattccgtatatggcttcacaggtgcgcagatgggaaaatta
ccatgcttggaaatatctgctagtgttacagcttatggacgtactatgatagagcaaaca
aagcaagaagtggaggatcactttcgaatagaaaatggatacaaaaacgatgcgatggtc
atatatggtgacactgattccgtgatggttaagtttggcgtgaaagatatagaagatgca
atgaaactcggtaaagaagcggccgattacgtgacatctaaattcattaagcctataaag
ctagagtttgagaaagtgtattttccgtatctcttgatcaataaaaaacgttatgctggt
ctgtattttacgaaacccgataaatatgacaaaatggattgtaaaggtctcgaaacggtg
cgcagagataattgtccattggtagcgaatatgatgaatacttgtttgcaaatattgctc
atcgaaaggaatccacatgctgctgtagattatgctaaacaagttattagtgatcttttg
tgtaatcgtatcgatctatctcaattagttatcacgaaggaattgacaaagacagattat
gcggccaagcaagcgcatgttgaactggcgacaaagatgaagaaacgagacgctggaaat
gcaccgaaacttggtgaccgagtggcgtacgtgttcataagcgcagctaaaggcacgccg
gcataccaaaaagcggaagatcccgtgtatgcactgcagaatagtatcccgatagataca
aactattatctggaaaatcaattggcgaaacctcttgtacgtatctttgaacctatcctc
ggcgacaaggctgagtcgcttctcctgaaaggagatcatacgcgtacgagatgcatcgct
acctcacaagttggagctctcgcggctttcacacgtaaaaaagagacatgtttaggctgt
aaagctgttttaccacctgacagagaagacaaggcagtatgcaagcattgcgaatctcaa
gaggctgaactgtttcataatgagttgcaggctcagcacaaattggaagaaaaattttcc
agattgtgggcggaatgccaaagatgtcaaggaagtctccatcaagaagttatatgctct
aaccgtgattgtccaatattttacatgagggtgaaatctcgattagacatggatgcgaaa
atcaaacgaattaaaaggtttggcgcattggaatggtaa
DBGET
integrated database retrieval system
