Acromyrmex echinatior (Panamanian leafcutter ant): 105143098
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Entry
105143098 CDS
T03917
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aec03041
]
105143098
Enzymes [BR:
aec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105143098
Spliceosome [BR:
aec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105143098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
KH_KhpA-B
KH_2
MOEP19
KH-I_KHDC4-BBP
CMS1
DUF2608
Motif
Other DBs
NCBI-GeneID:
105143098
NCBI-ProteinID:
XP_011049421
UniProt:
F4WB06
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MDDNWESDNRTSRRYDRGYDHRRGNRRERESQFYRRSNRSFGDNNDSSRQKYNNDSYRKS
DEKSDGTNGLVMYIDSSNIGRLIGRGGSKIKALQEDSGARINIDKQYNENGQSAVTLTGT
DDAQQRAKNLIKELLTERGGTERGVTERSNTHENESVQKTTSQPEEKEDIDWANFDWNKA
NEEYEERQKQKWAALPPIIKNFYKEDLAIANMPQSVVTQFRKTNNNIEVRHVFENTGGSD
ENMKIPNPVQTFEQAFHEFPDILTEIRKQNFEKPSPIQCQAWPILLSGQDLIGIAQTGTG
KTLAFLLPALIHIDGQVTPRDKRTGPNVLVMAPTRELALQIEKEVGKYSYHGIKAVCVYG
GGNRKTQIDTVTKGVQIVIATPGRLNDLVQANVLDVSAVTYLILDEADRMLDMGFEPQIR
KTLLGVRPNRQTVMTSATWPQGVRRLAQSYMKNPIQVFVGSLDLAAVHSVTQRIYMANED
EKTDMMHQFFQEMGPQDKVIVFFGKKSKVDDVSSDLALTNIDCQSIHGDRDQSDREQALE
DLKTGAVQILLATDVASRGIDIEDITHVLNYDFPRDIEEYVHRVGRTGRAGRTGESITFM
TRQDWHHAKALIDILEEANQEVPEEIYKMAERYDAWKKKKEQEDPYGRSNRGGRRGYRRM
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaattgggaaagtgataatagaacatcaaggagatatgatcgaggttatgat
cataggagaggaaatagaagggaacgagaaagtcaattttatagacgctctaacagatca
tttggagataacaatgactcgagtagacagaagtataataatgattcgtatagaaagagt
gatgaaaaatcagatggtacaaacggactggttatgtacattgatagcagtaacattgga
agactcatcgggaggggtggcagcaaaattaaagctctacaagaagatagtggtgctaga
attaatatcgacaaacaatataatgaaaatggacagagtgctgtgacactaactggtaca
gatgatgcgcaacaacgagctaagaatttaataaaggagttattaactgaaaggggtgga
actgaaaggggtgtaactgaaagaagtaatacacatgaaaatgaatcagtgcaaaaaaca
acatctcagcctgaagaaaaggaagacattgattgggctaattttgattggaacaaggct
aatgaagaatatgaggaacgtcagaagcagaaatgggcggctttacctcctattataaaa
aatttttacaaagaagatctagccattgctaatatgccacagtcagtggtaactcaattc
aggaaaactaacaataacatagaagttagacatgtttttgaaaacacgggaggttctgat
gaaaacatgaaaataccaaatcctgtgcaaacttttgaacaggctttccatgagtttcca
gatatccttacggaaatacgaaaacaaaactttgaaaaaccaagtcctatacaatgtcag
gcatggcctattctactgagtggtcaggatctcattgggatagcgcaaactggaacagga
aaaactcttgcctttttactgcctgctttgattcacatcgatgggcaagtaactccacgc
gacaaacgtactgggccaaatgttcttgttatggctccgacaagagaattggcattgcag
attgaaaaggaagtaggaaaatactcttatcatggaattaaagcggtgtgcgtatatggt
ggtggaaatcgtaaaacgcaaatagacactgtgacaaaaggtgtgcaaattgtaattgca
actcccggaagattaaacgatttggttcaagcaaatgtattggatgtgtcggctgtgacg
tatcttatactcgatgaagcagatcgtatgttggacatgggtttcgaacctcaaattcgt
aagactcttctaggtgtacgaccaaatagacaaactgttatgacaagcgctacatggcct
cagggtgtaagacgcttagctcagtcatacatgaaaaatccgattcaagtatttgttgga
tcgcttgacttggcagctgttcattctgtaacacagaggatttacatggctaatgaagac
gagaaaacagatatgatgcatcagttcttccaagaaatgggtcctcaagataaggtcata
gtatttttcggtaagaaatcaaaagtggacgatgtctctagtgatctggctttaacgaat
atcgattgtcagagtattcacggtgatagagatcaatcagatagagaacaagcattagaa
gatctgaagactggagctgttcagatccttcttgcgaccgacgtggctagtcgaggaatc
gatattgaagatattacacacgtattgaattatgacttcccacgggatatagaggaatac
gttcaccgagtcggtcgtactggacgcgcaggtcgaacaggtgaaagtatcacttttatg
acaagacaggactggcaccatgctaaagcactcattgatattcttgaagaggctaatcag
gaagtacctgaggaaatatataaaatggctgaaagatatgatgcatggaaaaagaaaaaa
gaacaagaagatccatacggaagaagcaacagaggcggtagacgcggctatcgtaggatg
taa
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