Acromyrmex echinatior (Panamanian leafcutter ant): 105143112
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Entry
105143112 CDS
T03917
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
aec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105143112
03015 mRNA surveillance pathway
105143112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105143112
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105143112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
105143112
NCBI-ProteinID:
XP_011049455
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSYEELNATKETQSSEQTDGHQDSECDIYESDSDAESQEG
GEQRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVTENNTEQQTNAK
ETKEKKVWKDKEDRWDHDRYNDEEQAPKRPEELIATYGYDIRNEEGPPRARRRRRYGRGP
NKYTRNWEDEDAYGKTTTGRGNNRRFHKNNEDFPALGNSKNTPNKVEEPVISSAWYSSKN
KTQNKTQNFPPLQSQQDNAKTKPAIASNTSTSENKASDESNNTSWKKDGRHITQNQNTNG
NTGSGGDAEKLTNTKPLSRENNKRNTQESVSLVASRTRGRGFKSNANNNMVTNRIVENKA
KGRGPGPVTIENRRNNTAQHNEEHQLAHDMKQQLNINDGSQYHQPARHNKGFFTSTNQHR
SNTVPPRMQQQQQQQQQQSHQQQTHSPQQTLQQQQQQQDSSGNRPKRYSSLRQRPTITET
SAQQNYPSQHAQHGYFPPQAGNSRAVLESQGYPQSHFEQSSSVAPATAPMAGQPVISLPP
GGQAASYAPPPFLVPPPQFIPPQTAPPSIINYVPGPNGPTFPPNFQGYQGYNPSVQPQGP
PPPQELFQPQGCTYYSPAQQQQQQQQAAPLRRPKAAIPILPPPDNQQSGRGRGRSTQYQN
NQSSSNTQQQTEQEIKSGNMVESDEKPVPGQFDSAQTEQPSTLNQESQKDQDTETIRTVN
NMDEEVEMITTADSHINIDMSLVKKDNLDDSVSVKELLEATSNEKNTVSHSPTTLASVET
ELGNIESAIPESTIVEKAAA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacacggcgacgtcgtaaatccaatcagtcatgtggttccgacgatctctcg
gattcgtacgaggagctaaacgctacgaaagaaactcaaagtagtgaacaaactgatgga
catcaagattcagaatgtgacatttatgaaagcgactcagacgccgaatcacaagaaggc
ggggaacaacgtgaaagtggagatgggcaagaagaggaaaaaccacagaagaagttggac
gatgacgaggatagacgtaacccgcaatatataccgaaacgaggaacgttttacgagcat
gatgatcgtacaactgacgaagtaactgagaataacacagaacagcagacgaatgcaaaa
gaaaccaaagaaaagaaggtgtggaaagataaggaagacagatgggaccacgatcgatac
aatgacgaagagcaagctccaaaaagacctgaggaattaatagcaacatatggttatgat
attagaaatgaagaagggccacctagagctagaaggagaagaagatatggtcgtggacct
aacaaatacacaagaaattgggaagatgaagatgcttatggaaagactacaactggtaga
ggaaataatagacgcttccataaaaataacgaagattttcccgctcttggtaatagtaag
aatactccaaacaaagtagaggaacctgtaatttcgtcagcttggtatagcagcaagaat
aaaacacagaataaaactcaaaacttcccaccacttcaatctcaacaggataatgcaaaa
actaagcccgctattgcttccaatacatccacaagtgaaaataaggcatcagatgaatcg
aataatacatcctggaaaaaggacggtagacacattactcaaaatcaaaatacaaatgga
aacactggttctggcggtgatgcagaaaagttgactaataccaagccattatcaagggag
aataacaagaggaacacccaggagtctgtaagcttggtcgcaagtaggacgcgtggaaga
ggtttcaagtccaatgctaataacaacatggtcactaacagaatagttgagaataaagca
aaagggcgcggcccgggtccggttacaatagagaatcgaagaaataataccgcgcagcac
aatgaagaacaccagcttgctcatgatatgaaacaacaacttaatattaatgatggtagt
cagtatcatcaacctgcacgacacaacaaaggttttttcacatccaccaatcaacacaga
tcaaacacagtaccccctagaatgcaacaacaacaacagcaacaacaacagcaatcacat
caacaacaaacgcattcaccacagcaaacattacagcaacaacagcaacagcaggatagt
tctggaaatagacctaaacgatattccagtcttcgtcaacgacctactattacagaaact
tccgcacaacagaattatccatctcaacatgcccaacatggatattttccacctcaagct
ggaaattcaagagccgttctagaatctcaaggttatccccaaagtcattttgagcagtct
tcttcggttgctccagccacagcacctatggcagggcaacctgttatttctctgccgcct
ggtggacaagctgctagctacgcaccaccaccattcttagtaccaccaccgcaattcata
ccacctcaaacagcaccacctagtataattaattacgttcccggtccaaatggcccgaca
tttccaccaaactttcaaggttatcagggatataatccttcagtacagcctcagggtcca
ccgccgccccaagaattgttccaaccgcaaggatgtacttactatagtcctgcgcaacaa
cagcagcaacagcagcaagcagctcctttgcggcgaccgaaagcagcgatacctattctt
ccaccacctgataatcagcagagcggtcgaggaagaggtagaagcactcagtatcagaat
aatcaatctagcagtaacacgcaacaacagactgaacaagaaatcaagagtggtaacatg
gtggaaagtgacgagaaacctgtgccgggacaattcgacagtgcgcaaaccgaacagcca
agcacattgaatcaggaatcccagaaggatcaagatacggaaacgatcagaacagtgaac
aatatggacgaggaggtagagatgattaccactgctgactctcatataaatattgacatg
tcactcgttaaaaaagataacttggacgatagcgtcagtgttaaggaactattagaagcg
acttctaatgaaaagaatacggtttcgcacagtccaacgacattggctagcgttgagact
gaattaggtaacattgaatccgcgattcccgaaagtaccattgttgagaaagctgcagcc
taa
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