Acromyrmex echinatior (Panamanian leafcutter ant): 105143224
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Entry
105143224 CDS
T03917
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105143224
09122 Translation
03013 Nucleocytoplasmic transport
105143224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105143224
03041 Spliceosome [BR:
aec03041
]
105143224
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105143224
Spliceosome [BR:
aec03041
]
Complex C
Other components
EJC/TREX
105143224
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105143224
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Motif
Other DBs
NCBI-GeneID:
105143224
NCBI-ProteinID:
XP_011049684
LinkDB
All DBs
Position
Unknown
AA seq
1104 aa
AA seq
DB search
MASKVWHTELWKSWDKHGKNDFLKLIKHKFKEGNTPEWRRGLYELISNGIHGNVKKDIVV
QTLGELTSFDGSIPSAIVDIFTLIDAEAHNEERSNFYYIVKESEKFLTDRILKERLEIET
LQDVGTLKNKNFQTKFIKVKTKLYYKQRKFNLFREESEGYSKLIVELNQERPDSEVASTL
EIVKSLIGYFNLDPNRVLDILLETFENRPQDDALFIPLIRSYMSDQQVLCEVLGFKYCST
INATPFSLQKVTALMLQHGVIKLDDILPWLVPDDKIIISDHEQVMKQAKEYVRKLSVIST
KDKEDIVEEKENAQDKYASNQKFGLCEALLEVGAWEVAQSLFNRLPDYCFTDQRPIALAL
CKMIQALVESVYRKAAEEMTSDQLDAMAGGDLLKNEAGYFSQVRNTKKSSQRLKETLAEQ
DLAVTLCLLMAQQKHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVER
LPSIHSMLQDNHIHADVAFFLARPMFAHAINIKYDALRKADPNYKKMSTAMKQLKYAEAA
QTVMAPVAQSVRPLHPLKVWEDISPQFLVTFWSLSMYDLYVPVESYQREVGKLKQLAVQT
VDSKDMNISKGKKEQERYTTLIEKLQDEKRKQEEHVEKVFAYLRQEKDTWFLSRSAKSAK
NETITQFLQLCLFPRCTFTTVDAMYCAKFVHPIHSLKTANFSTLLCYDRLFCDITYSVTS
CTENEANRYGRFLCAMLETVMRWHSEKAIFDKECSNYPGFVTKFRVSNQFSEANDMVGFE
NYRHVCHKWHYKITKAIVVCLDSKDYVQIRNSLIILIKILPHFPVLAKLSQILERKVEKV
REEERGQRQDLHVLGAAAKTQDTTNNETSEKVSNGVTVKENNNGDTRSEKENKEQREKRS
SSSQTHHENSEKFRKKEDSKDVSEVKEKYVKKEEIKDDEGLDKKDRKYYKEEHYYSSSVD
NLDRDLSSVSNSSASSGPIQEGPERVSDVKRRKIESTQKVPIFLDKKERSSKGKARDEQK
ELRREKKQGRKRDRAEESIATTEQKRRKDDERAKSTHQNGDIPEHREKHHYSKEKSPYSK
DRPHEREGRESRDKHRRSSDPKRR
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaagtatggcatacagaattgtggaagtcatgggataagcatgggaaaaat
gatttcctcaagctaatcaagcacaaatttaaggaaggcaacacaccagaatggagacgc
ggattatacgaattaatatcaaatggaatccatggaaacgtaaaaaaggacattgtagtt
cagacattaggtgaacttacgagttttgatggttctataccatctgcaatagtggacata
tttactttaattgatgcagaagctcataatgaagaaaggagtaacttttattatattgtg
aaagagtctgagaagtttttgaccgatagaatattgaaagaacgtttagagattgaaact
ttacaagatgtaggcacattgaaaaacaaaaattttcaaaccaagtttataaaagtaaaa
accaagttgtattataaacaaaggaaatttaatttatttcgtgaagagagtgagggctat
tccaagctcattgtagaattaaatcaagagcgtccagacagtgaggtggcgtcgacattg
gaaattgttaaatctcttattggttatttcaatcttgatcctaatagagtactcgatatc
ttattagaaacctttgaaaaccgaccacaagatgatgctctatttattcccttaatacgt
tcatacatgagcgatcagcaggtactttgtgaagtgttaggattcaaatactgctccacc
ataaacgctacgccgttctcgctgcagaaggttaccgcgttaatgctgcagcatggtgtg
attaaactggatgatatattaccttggctagtgccagacgataaaattattatatcagat
cacgagcaggtaatgaagcaggccaaggaatacgtgcggaaattgagcgtgatctcaaca
aaagacaaagaggacattgtagaagagaaggaaaacgcacaagacaaatatgcaagcaat
caaaaatttggattatgtgaagcgcttttggaagttggagcttgggaagtggcacaaagt
ttattcaatcgcttgccggattattgttttacagatcaacgtcccatagcactagcattg
tgtaaaatgattcaggctcttgttgaatccgtatacagaaaggccgccgaagaaatgacg
tctgatcaactcgatgctatggcaggcggagatctgttaaaaaatgaggccggttacttt
agtcaagtccgcaacacaaagaaatcttcacagcgtttgaaggaaactctcgccgagcaa
gacctcgcagttactctgtgcctgttaatggcgcaacagaaacattgcgttgtttacaga
gagacggataaatctcatttaaaactcgttggcaagttgtacgatcaatgccaggatacg
ctcgtgcaatttgggactttcttgggttcgactatgacagtagacgagtatgtggagcga
ctaccgtcgatccattctatgcttcaggacaatcacatacatgcagacgtcgcatttttt
ttggcacggccaatgtttgcgcatgccataaatataaaatatgacgctctccgtaaagct
gatccgaattataagaaaatgtccacggctatgaagcaattaaaatacgcggaagctgcg
caaaccgttatggcacctgttgctcagtctgtcagaccgttgcaccctttaaaagtttgg
gaggatatatcgccgcaattcttagttacgttttggtctctgtcgatgtatgatttatac
gtaccggtggagagctatcaaagagaagtcggcaagttgaagcaacttgcagttcaaact
gttgattccaaagatatgaatataagtaaaggaaagaaggaacaagaaagatataccact
cttattgaaaagctacaggacgaaaaaaggaaacaagaagaacatgtcgaaaaagttttt
gcatacctgagacaagaaaaggatacatggtttttgtcacgaagcgctaaatcggcgaaa
aacgaaacgataacacagtttctacagttgtgcctattcccgcggtgtacatttacaact
gtagatgccatgtactgtgcgaaatttgtacatcccatccactccctgaagactgcaaat
ttttcaactctgctttgttatgatcgtcttttctgtgatattacatattcagttacttca
tgcacagagaatgaagcaaatcgatatggcagatttttatgcgccatgctggaaactgtg
atgagatggcattccgaaaaagccatatttgataaagaatgcagtaattatcctggtttc
gtgaccaagtttcgtgtaagcaatcaattttctgaagcgaatgatatggtcggatttgaa
aattatagacatgtgtgtcacaagtggcactataaaatcacaaaggctattgtagtgtgt
ctagattcgaaggattatgtgcaaataaggaattctttaataatattgatcaagatattg
cctcattttcctgttttggcgaaactctctcagatcctcgaacgtaaagtagagaaagta
agagaggaagaacgtggtcaacgtcaagatttgcacgtcttaggcgcagctgctaaaaca
caagacacaacgaataatgaaacaagtgaaaaagtcagcaatggagtaacggtgaaagaa
aataataatggagatactcggtcagaaaaggaaaacaaggaacaacgagaaaaacgaagt
tcctccagtcaaacgcatcatgaaaactctgaaaagtttagaaagaaagaagacagtaag
gatgtttcagaagtaaaagaaaaatatgtaaaaaaagaagaaataaaagatgatgaggga
ttagataaaaaggatcgcaaatattataaggaagagcactattatagcagtagtgtagac
aatttagaccgggatctttcaagtgtgtcaaatagcagtgctagttcaggtcccatacaa
gaaggtcctgaaagagtttcagatgtaaaaagaagaaaaatagagagcactcaaaaggta
cctatatttcttgataagaaagaacgttccagtaaaggaaaagcacgtgatgaacagaaa
gagctgcgtagagaaaagaaacagggtcggaaaagggatcgggcagaggaatccatagca
actactgaacagaaacggagaaaagatgatgaaagagccaaaagtacgcatcaaaacggt
gacattcctgaacatagagaaaagcatcattacagtaaggaaaaatctccatactcaaag
gatcgtcctcatgaacgcgaaggacgtgaaagtcgtgataaacacagaaggagttcagat
ccgaaacgaagatga
DBGET
integrated database retrieval system
