Acromyrmex echinatior (Panamanian leafcutter ant): 105143304
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Entry
105143304 CDS
T03917
Name
(RefSeq) ATP-dependent RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105143304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105143304
03012 Translation factors [BR:
aec03012
]
105143304
Enzymes [BR:
aec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105143304
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105143304
Translation factors [BR:
aec03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105143304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
ResIII
nSTAND3
NPHP3_N
ATPase
ATPase_2
AAA_14
AAA_19
PhoH
NB-ARC
ABC_tran
NACHT
RsgA_GTPase
TAFII28
Motif
Other DBs
NCBI-GeneID:
105143304
NCBI-ProteinID:
XP_011049844
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MLRFFKMYRRGFRGMSCSYTRHDRDVHSIWRNNQQGLEQIQSTSGNGRTYSQARRPPGLR
GKEIGMYYRNKNREKQKKKAPEVLKLSFHIQQSIKTMLNNAEKYYNPVFCTNFESEQDNK
YHQFHDTQFKRKFLEIIHGNIQQNLAKAMNVTSKLQRNSDIDRILQNDYRQKHNQDAYNN
MLKFRLKLPAYKKRLEILQLIEDNQVVVISGETGCGKTTQIAQFILDDELETGNGSVTRI
ICTQPRRISAISVAERVAMERAENLGNSVGYQIRLEKQPSRDHGSILFCTTGILLQIMKH
DPALKGFSHVILDEIHERTTESDFVITLLKQVILKRTDLKVLLMSATLNAENFSKYYNNC
PMIHIPGFTYPVEEFYLEDVLSFINHKFPEAPPEPKGYRKHLKRYKEQQYKKEEFLDILQ
PYVRQLMAEKKYETHVIDQLRNPNSENLSLELIEKLVRYICNTKGPGAILIFLPGMMDIS
NLNKMMLESGCYPSHAYVIYPLHSRMPTVDQKLIFKEPSHGIRKIIIATSIAETSITIED
VVYVIDCGKIKYSKFDLNKNIQTLEPEWVSLANAKQRRGRAGRVKSGECYHMYTKAREMT
FDHYPLPEMLRTRLEEVILQIKILQLGRVKEFLSTVMDPPDLKAIDLSLDLLETLNALDK
DETLTPLGYHLAHLPLDPRTGKMILWGALFSCVDPIFAIAASLTFKDAFYCPLGQEEIAN
KKKLELSMGECSDHIALAEALRRYEVARQRGNARQFCREYFLSFNTLKLLSEMKAQFAQY
LCEMKFLDSENPSHIGSNRNSNNIALIKAIVCAGLYPNIAVVRRVTKNGVISWTPEDGSV
RIHPSSVNNRVSSFPSRYLTYFTKQRSTAIFLHDTTCISVPILLFAGPNMSIKREKGQYI
ISINFSENIICEQESAELIQKLQQALNGLLEYKVTNPTTVSWSTFEGDLLNAIIELVSQT
DHEMGFGNTHENASYYEDSTYDIN
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgttttttcaaaatgtaccgacgaggttttagaggcatgtcctgctcctacaca
cgacatgatagagacgtacattcaatctggagaaacaatcagcaaggacttgaacaaata
caatctacatctggaaatggaagaacttactcacaagcacgaagacctcctggactaaga
ggaaaagaaataggaatgtattatagaaacaaaaatagagagaaacagaaaaaaaaggct
ccagaagttcttaaattgtcatttcatatacagcaatcaattaaaactatgttaaataat
gcagagaaatattacaatccagttttctgtacaaatttcgaatctgagcaagataacaag
tatcatcaatttcatgacacccaatttaaaagaaagtttttggaaattatacatggtaat
atacagcaaaatcttgccaaagctatgaatgtaacttcaaagttgcaaagaaatagtgat
atagacagaatattacaaaatgattacagacaaaagcataatcaagatgcttataataat
atgttgaagtttcgattaaagttaccagcatataaaaaaagattagaaatattacaattg
attgaagataatcaagttgttgtcattagtggagaaactggatgtggcaaaaccacacag
attgcacaatttatattggatgatgaattagaaactggaaatggcagcgttactcgaata
atttgcacgcagcctagaagaatttcagccatttctgttgctgaacgtgtagctatggaa
agagcagaaaatcttggaaattctgttggctatcagatacgacttgaaaaacagccatca
cgagaccatggaagtatattattttgtactactggtatattactacaaattatgaaacat
gatccagcattaaaaggtttctctcatgtgatactggatgaaattcacgaacgtactaca
gaaagtgatttcgttattacattattaaaacaagttattctgaaaagaacagacttaaaa
gttctcttaatgagtgcaacattgaatgcagaaaatttttcgaaatattataacaattgt
cccatgatacatataccgggatttacttatcctgtggaggaattttatttagaagatgtt
ttgtcatttataaatcataaatttcccgaagcaccacctgaaccgaaaggttatagaaaa
cacctaaaaaggtataaagagcagcaatataagaaagaagaatttttggacatattacaa
ccttatgttaggcaacttatggctgaaaaaaaatacgaaacacatgttattgatcaatta
cggaatccaaatagtgaaaatctttcgttggagctcatagaaaaattagttagatatatc
tgtaatacaaaaggtcctggagctattcttatttttttacctggtatgatggatatatcg
aacttaaataaaatgatgttagagtctggatgttatccaagtcacgcatacgtcatctat
cctcttcattcacgtatgccaacagttgatcagaaacttatatttaaagaaccatctcat
ggcattcgtaaaataattattgcgacttcaatcgctgaaacatcaattactatagaagat
gttgtgtacgtaatagattgcgggaaaataaaatattcaaaatttgatctaaacaagaat
attcagactttagaacctgagtgggtatctttagctaatgccaaacaaagacgcggtaga
gctggcagggttaaaagtggagagtgttatcatatgtatacaaaagcacgagagatgaca
tttgatcactatccgttgccagaaatgttaagaacacgcttagaagaggtaattttgcaa
ataaaaatcttacaattaggaagagtcaaagagtttctatctaccgtcatggatccacca
gatttgaaagctattgatctatctctcgacttacttgagacacttaatgccctcgataaa
gacgagactttgactcctttaggttatcatttagcacatttgccacttgatcctagaaca
ggaaaaatgattttgtggggtgcattattctcttgtgttgatccaatatttgctattgct
gctagtctcacatttaaagacgctttctattgtccattaggacaagaggaaatagctaat
aaaaaaaagttagagctcagtatgggagagtgtagtgatcatattgctcttgcggaagct
ctaagaagatatgaagttgcacgtcaaagaggaaatgctcgccaattttgccgagagtat
ttcctctccttcaacacattgaaacttctctccgaaatgaaagctcaatttgcacagtat
ttatgtgagatgaaatttctggatagtgaaaacccaagtcatataggctctaatagaaat
tcgaataacatagcgttgataaaagctattgtctgtgcaggattatatcctaacatcgct
gttgtaagacgagttactaaaaatggggtaattagctggacaccggaagatggtagtgtg
cgtatacatccatcgagtgtaaacaacagagtttccagctttcctagtcgttacttgaca
tatttcacaaaacaacggtccactgccatatttttacatgatactacatgtataagtgta
ccgattttattgtttgctggaccaaatatgtcgataaaacgagaaaaaggacaatatata
attagcatcaatttttcggaaaacataatttgcgaacaagaatccgcagaactgatacag
aaacttcaacaagctctaaatggtttattggaatataaagttacaaatccgacaacagta
tcttggtcaacctttgaaggagacttattaaatgcaattattgaattagtctctcaaaca
gatcatgaaatgggtttcggtaatacgcacgaaaatgcaagttattatgaagattccact
tatgacatcaattaa
DBGET
integrated database retrieval system
