Acromyrmex echinatior (Panamanian leafcutter ant): 105143363
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Entry
105143363 CDS
T03917
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105143363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105143363
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105143363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
105143363
NCBI-ProteinID:
XP_011049958
UniProt:
F4WBW7
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MSFGSGFGASTSTPAPTFAFGTTPASTATPVKPVPGFGTPSFGFSTPTTSTPSLFSSPST
QTTGFGTGTGFGTPTATGFGSAPSTGFGAAPTFGTPSTSAFGSASAFGSTPVSSTTTGFG
TTSTFGSTPAPTTGFGGFGTATTSTLSFGGFGGFGTATTTAAPSLFGGFGTPNTASTGFG
TSGFGAFGSKPVTTSGTFGGFGTGTGFTGFGTGLTQPQQQQQQQQQQQPTNTASEALYNA
VFNCQLYNDERDNTIARWNLIQALWGTGKAYYSVNAPPIDLTQENSLCRFKAIGYSRIPD
ADNNDGLVVLCFNKKEKDVQDGKQQLIAFFNGLLGNKSNLTVTVDNIKSTGENKSQVTIY
VSEKGITGSYRKIPANELVAYLSQVMQKQQLVQNGVEDIFPLVKLDPSQLKEYLDNPPCA
IDARLWKQAQLDNPNPELYIPVPMVGFQQVKHRLKCQEEETARHRAFLDMAAEKIQGLQR
QHTATQARLKEHRRTLLELQHRVLQVLVRQEITRKVGLSLQPEEEVLTRRFEAMHSQISA
PTQYKGRISEMLSQLRMRRHIDIQNQERYTMDPIAQDDIKAYLSMEQQGMAQLISTINAD
LESLKVIKDGMSELLMSQSIS
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggtagcggcttcggagcgtccacgtcgacgcccgcacctacgttcgcattc
ggcaccacgccggcatccacagcgacgccggttaaacctgtgccaggatttggaacaccc
tcgtttggatttagtacaccgactacttcaacgccaagcttgtttagctcgccatcgacg
cagactactggatttggtactggcactggatttggtaccccgacagccactggttttggc
agtgcacctagcacgggttttggagctgcacctacatttggtaccccgtcaaccagcgcc
tttggttcggcatccgctttcggtagtactcccgtttcctccacaactactggatttggt
acaacttcgacatttggcagcactcctgctcccacaactggtttcggtggttttgggaca
gcgacaacatcgacattaagttttggaggtttcggtggatttggaactgcgaccactact
gctgcccctagcttgtttggtggattcggcactccaaatactgcttcaacaggtttcggt
acatcaggttttggtgcatttgggagcaaaccagttactactagtggtacattcggtgga
tttgggacagggacaggattcactggatttggtactggattgacgcagcctcaacagcaa
cagcaacaacaacaacaacaacaacctacaaatactgcatcagaagctctctacaatgcc
gtgttcaattgtcaattgtataatgacgagcgagataatactattgccaggtggaatctt
atacaagcattatggggtacaggaaaagcttattactccgtaaatgccccacctatagac
cttactcaggaaaattcgttatgcagatttaaagccattggatacagtcgcatacctgat
gctgacaacaatgatggtttagtagtattatgctttaataagaaagagaaggatgtacag
gatggaaaacagcaattaatagcattttttaatggtttgctgggaaataagtccaatctg
acagtaaccgttgataatattaaatcaacgggggagaacaaaagtcaagtgacaatatat
gtatcagaaaaaggaatcactggttcttacagaaaaattcctgctaatgaattggttgca
tatttatcgcaagtcatgcaaaaacagcagttagtacaaaatggagtagaagatatattt
ccactggtaaaacttgatccatcacagctgaaagagtacctagataatccaccttgcgct
attgatgccagattatggaagcaagcgcagttggacaatccgaatccagagttgtatatt
ccagttcctatggttggctttcagcaagttaaacacagactgaaatgtcaagaagaggaa
actgctagacatagagcgtttttggacatggcagctgaaaaaatacaaggcttacaaaga
cagcacacagctacacaagccagacttaaggaacataggcgtacattgttggaacttcag
cacagagttctacaggtgctggtacggcaggagattacgcgaaaagtgggattatcctta
caaccggaagaagaagttctaacacgcagatttgaagcaatgcattcgcaaatcagtgct
ccaacgcaatataaaggaagaattagtgaaatgctttctcagctcagaatgaggcgacac
atcgatattcagaaccaagagaggtatacaatggatcctatagcacaggatgatattaaa
gcgtacctaagtatggaacagcagggcatggcgcagcttatttcgacaataaatgctgat
ttagaaagcttaaaagtcattaaagatggaatgtcagagcttttgatgagccaaagtata
tcatga
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