Acromyrmex echinatior (Panamanian leafcutter ant): 105143746
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Entry
105143746 CDS
T03917
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105143746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aec03041
]
105143746
Enzymes [BR:
aec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105143746
Spliceosome [BR:
aec03041
]
Complex A
U2 snRNP components
U2 related factors
105143746
Complex B
105143746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
105143746
NCBI-ProteinID:
XP_011050528
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSAEPEKKRRRSRSRDRERERDKGRHRERRSRSRDRDRE
RSDRRERSERDRDRERKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKDKEKGDNEELPF
DHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANLQLPMKKWS
LEDDSDEETPVVQNNKETKEEGAKEEIEEVNEEVKDKEEEIDPLDAFMAEVQEEVRKVNK
FDGKAPKNANNGTNSASQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLH
ETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEVYKEELEGIRVKG
KGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTL
AFLLPMFRHILDQPPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTG
ISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM
RIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVVCKDVEQHVVVLEEDQ
KFYKLLEILGHYQDKGSTIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILD
FKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFIT
SEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESE
AALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIAKPTATSVTVPGQP
IPSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAA
KLNTKLNYQPREEDLVESDVETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYS
EAGLTVRGTYIAPGKTPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAH
TASRGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaagtagcgacaaagacagacaccaccggcgaagatcgaggtcgagatcacga
tcgagatcggccgaacctgagaagaaacgacggcgatctagaagcagggatcgagaaagg
gagagagataagggacgacatcgagagcggaggagtcgttcgcgggatagagacagagag
aggagtgacagaagggaacgttccgagagggacagggatcgcgagagaaaacgtggagac
agtaaagaaaagcgtcttacaggctcaaaatcttcgcgctctggcaaagaacgatcgaac
aggtcccgttcccgtgatagaaaggataaagagaagggtgacaatgaggaattacctttt
gatcacacaaaattagacaaggaggaagagcaaaaaaggctggaattggaaatgcaaaag
agaagagagaggatagaaagatggcgagcagaaaggaagaagaaagaactggaagcaact
aaaaaagacggtaagacatctattttggcaaatcttcagctacccatgaaaaagtggtcc
cttgaggatgatagtgacgaagagactcctgtggtacagaataacaaggaaacaaaagaa
gaaggtgcaaaagaagaaattgaagaagtaaatgaagaggtaaaagataaggaggaggaa
attgatccacttgatgcttttatggcagaggttcaagaagaagtaagaaaagtaaataaa
tttgatggtaaagctccaaaaaatgccaacaatggcactaattctgcatcgcagagtggc
ggagtggttattgtaactggagtagctaagaaaaaagtacagaaacaaaaaggagaattg
attgaacaaaatcaagatggattggagtactctagcgaagaagagggcgagaatcttcac
gagactgcggccggtatagcaaacaaacagaagcgagaattagctaaagttgatcatgct
acaacagagtatcaacccttccgaaagtctttctatgttgaagtgcctgagatagcaaga
atgacaccagaagaagtggaagtgtacaaagaagaattagaaggcattcgcgtgaaaggt
aaaggttgcccaaaacctatcaagtcttgggcgcaatgtggcgtaactaagaaggaatta
gaagtattaaagaaactcggttatgagaaaccgacacctattcaatgccaggcgattccg
gcaatcatgtctggtcgcgatctcataggtatagcgaaaaccggtagcggaaaaacgcta
gcttttcttttacctatgtttcgacatatactcgatcagccgccgttagctgacggtgac
ggaccaatcgcgttgattatgacaccaactagagaattgtgtatgcaaattggtagggat
tcgaagaaattcacgaaatcactgggtctttcgcacgtgtgcgtctatggtggaactggc
atttctgaacaaatagcagaacttaagagaggagctgaaatcatcgtgtgcacaccagga
aggatgattgacatgcttgctgctaacagcggacgagtgactaatttacgtcgagtaacg
tatgtagtacttgatgaggccgacagaatgtttgatatgggtttcgaaccgcaggtgatg
cgaattatggaaaatgtaaggccggatagacaaacggtactgtttagtgcaacgttccca
cgacaaatggaggcactagccagaagaatacttacgagaccagtcgaagtacaagtcggt
ggacgttctgtcgtttgcaaggatgtggagcaacatgtagttgtactcgaggaagatcag
aaattttataagttgcttgagatccttggacattatcaagacaaaggttccactattata
tttgtagacaaacaagagaatgcagatacgttgctcaaggatcttatgaaagcttcgtat
tcctgcatgtctcttcacggcggtatagatcaatgcgacagagattcaaccatattggat
ttcaaagcgggacgaacaaaattgctcgtggccacgtccgtcgccgctagaggcttggac
gtcaaacatttggtattagttgtcaattatgattgtcctaatcactacgaggattatgta
cacagatgtggtagaactggccgagctggaaataaaggatatgcatacacctttattaca
tcagagcaagaacgttacgctggtgatattttacgtgcgcacgagttagcgggcgtacct
gttccagaacccttgcgccaattatgggaaggttacaaagcccgccaagccgcggatgga
aagaaggttcatactggaggtggtttcagtggcaaaggatttaaatttgacgaatcagag
gctgccttggcgaatgaaaagaagaaattccaaaaagcagccttgggactgcaagattcc
gacgacgaggatatagaaaacgatattgaccaacaaatcgagagcatgctagcgcccaag
cgaactgttcgtgaaattgcgaaaccgaccgcgaccagtgttacagtgcccggtcaacct
attcctagtgccactgataaacttgaattggccagaagactggcgtcgaagataaacatt
gcaaagaatctgggcgctgaagcgaaaggcgctactcaacaagcagcggaagccatacta
aagggtgcaggacctaccaatcttatcacggcaaagacagtcgcggaacaactagcagcg
aaactgaatactaagttgaattatcagccacgcgaggaagatctcgtagaaagtgatgtg
gaaacgggcgagcaaacattccgcaagtatgaagaggaactcgagatcaacgacttcccg
caacaagcgagatggcgagtcacaagcaaggaggctcttgctcaaatctcagaatattct
gaggcaggtctgacagtgagaggaacgtacatcgcacctgggaaaacgccaccagagggg
gagaggaagttatacctagcaatagaatcgacaagtgagttggcggtcagcaaggccaag
gcggaagtgtctcgactcatcaaggaagaacttatcaaactgcaagcgtctggtgctcac
actgcatcgcgaggtcgctataaagttttataa
DBGET
integrated database retrieval system
