Acromyrmex echinatior (Panamanian leafcutter ant): 105143975
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Entry
105143975 CDS
T03917
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
aec03015
mRNA surveillance pathway
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105143975
09122 Translation
03013 Nucleocytoplasmic transport
105143975
03015 mRNA surveillance pathway
105143975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105143975
03041 Spliceosome [BR:
aec03041
]
105143975
03009 Ribosome biogenesis [BR:
aec03009
]
105143975
03012 Translation factors [BR:
aec03012
]
105143975
Enzymes [BR:
aec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105143975
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105143975
mRNA cycle factors
Stress granule specific factors
105143975
Spliceosome [BR:
aec03041
]
Complex C
Other components
EJC/TREX
105143975
Ribosome biogenesis [BR:
aec03009
]
Eukaryotic type
90S particles
Helicases
105143975
Translation factors [BR:
aec03012
]
Eukaryotic type
Initiation factors
eIF-4
105143975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
AAA_30
TniB
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
105143975
NCBI-ProteinID:
XP_011050894
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MADKSRRAAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRSI
KPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILAL
GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDES
DEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMHG
DMPQKERDNIMKEFRSGQSVINYDLPNNRELYIHRIGRSGRFGRKGVSINFVKTDDIRIL
RDIEQYYSTQIDEMPMNVADLI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcggataagtcacggcgtgcagctcaaacggaagatttatcgaacgttgagttcgaa
accagcgaagatgtcgaggttattcctaccttcgacaacatgggtctccgcgacgaattg
ttacgcggaatatatgcgtacggttttgaaaaaccatcagctattcagcaacgatctatt
aaacctatcatgaagggcagagatgttattgctcaagcacaatctggtacaggaaaaacc
gctaccttctcaattgcgatattacagtcactggatacgcaagtacgagaaactcaagtt
ttggttttgtctccaactcgagaacttgccactcaaatccagaaagttattcttgcattg
ggagattttatgaacgtacaatgtcatgcttgcattggtggtacaaatcttggagaagac
atcagaaaactcgattatggccagcatgttgtatctggtacacctggtagagtatttgat
atgattaaaaggcgagtactcagaaccagagctatcaaaatgctggtacttgacgaatct
gatgaaatgttaaacaaaggtttcaaggaacaaatatatgatgtgtatcgatatttacca
ccagcaacacaagttgttttagtttcagccactttaccgcatgaaattcttgaaatgact
agcaaatttatgacagatcctatccgtattcttgtcaaacgtgatgaattgacattggaa
ggaatcaagcaattcttcgttgctgtggaacgagaagagtggaaatttgatacactctgt
gatttatacgacacgttaacaataacacaagcggttatcttttgtaatactaaacgtaaa
gtagactggttgacggaaaaaatgcgagaggccaattttacggtctgttccatgcatgga
gatatgccacaaaaagaacgagataacataatgaaagagtttcgatctggtcagagcgta
attaattatgatttgcctaacaatcgtgaattgtatattcatagaataggtcgatcagga
cgttttggacgcaaaggtgtgtctataaactttgtaaaaacggatgacatcagaattctt
cgagatatcgaacaatattattctacgcaaatagacgaaatgccgatgaatgtggctgat
ctaatataa
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integrated database retrieval system
