Acromyrmex echinatior (Panamanian leafcutter ant): 105144845
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Entry
105144845 CDS
T03917
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aec03021
]
105144845
03036 Chromosome and associated proteins [BR:
aec03036
]
105144845
Transcription machinery [BR:
aec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
105144845
Chromosome and associated proteins [BR:
aec03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
105144845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
Tex_central_region
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
HTH_10
Tex_N
Motif
Other DBs
NCBI-GeneID:
105144845
NCBI-ProteinID:
XP_011052354
LinkDB
All DBs
Position
Unknown
AA seq
1767 aa
AA seq
DB search
MAEYLDSEADVSEGEEELDQNEKKKLRKLKAVEESDDEEEDDEDQLREELKDLIDDNPIE
ESEGEDSDGSDHHKKRKKSDDEDFDDRLEDEDYDLIEENLGVKLERKRFKRLRRIQDEES
EEEQEKEADEERDAIANELFEGSGDERDVITEDERRSERSHRPEADTFEEGSDEGEYTDA
DDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYNEFDKYGEEDYEEEEEEEE
DEYMDEDADIERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRTTDIPERMQ
LRSVPVTSVQEGSDELDLEAEWIYKQAFCKPTVSIQDAHLNAEAKERARKGPQTIGKIKK
ALDFMRNQHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLSQRKENLLKLFDKMR
NYQLDEIMKNPDAPLPDNVRVIKDDDIERLKNVQTSEELNDVYNHFMLYYSHEIQAMQES
VRQKEKQARREERIQRRKQQIAEAEENGEDPPEEEEMPEEEEVDDTLKQAVRSGPYSICR
KAGLDGLAKKFGLTPEHYAENLRDNYQRHEVDQEPTEPTTIATEYSSSRFKTAEEVLKAA
QLMVAIQLAREPLVRKCVREMYMERAKMSVKPTKKGIKEIDENHPIYTMKYLKDKPVRDL
VGVQFLNLMIAEEDKLITITLSDTIEGNTSNNYVDEMKQLYCRDEFSKLVQDWNALRVGS
VEIALNRMVIPHLKKELRANLIAEAKECVMRSCCRKMYNWIKVAPYSCEFPEEEDEEWDT
SKGLRVMGLSYVPDYSQAAFTCLIAADGECTDYLRLPHLMKRKNSYRESEKTLKEADLLA
LKNFIATKKPHVIVVAGESREAMMIAADIKECITHLSEEEQFPNIQVEICDNELAKIYAN
SNKGNSEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLKYHNLQDQLPKEELL
ENLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRLENRT
QLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALE
YDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYKDL
RVLYQSSSAEKLFDVLTKETPETFYVGKLVLATVVGISHRKPQGDQLDQANPVRNEETGL
WQCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHVANPCE
RVGMGQIIHCRIIKIEVDRFSVECTSKSSDLADKNHEWRPQRDPFYDTESEQRDIKVEED
AKKAKQRQIYVKRVIVHPSFHNISFAETVKLMQTMKQGEAIVRPSSKGADHLTVTWKVTD
DILQHIDVREEGKENTFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYKST
VEGIKDKAEEILKEQKKENPNGIPYIISAAKTYPGKFLLSYLPRTRCRHEYVTVTSEGFR
FRAQMFGRVSDLLRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYTTTPGTVSGMNQEAIQR
VAQNLPHHMLHSLSQVANQTPHHYPPHTPGAASTTGYGGGHTYPNTPYTPSGQTPFMTPY
QTPHHTPHHSQPTPRYGQQTPSHHQGPFVHPPPPSMTPSHHRSAQSHRPTPPLSTPSGDP
MDWKKAAEAWARLKSGPRVSGSTPRYEESRKTPRSYDESSGRTTPSGRSRPSTRTPSYKS
PRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtatctcgactctgaagcggacgtgagcgagggtgaggaggagttggaccag
aatgagaagaaaaaactgagaaagttgaaggcggtggaggagagcgacgacgaggaggaa
gatgatgaggatcagttgcgcgaggaactgaaagatttgatagatgacaatcccatagag
gaaagcgaaggtgaagacagtgacggttctgatcatcataagaagcgtaagaaaagtgat
gatgaggattttgatgatcgcttggaagatgaagactacgatctgattgaagaaaattta
ggcgttaagcttgaaagaaaacgttttaaacgtcttcgaagaatccaagatgaggaatca
gaggaagaacaagaaaaagaagcagatgaagaaagggacgctattgctaatgaattgttt
gaaggttccggagatgaaagggatgttattacggaggacgaaagacggagtgaacgaagt
cataggccggaggcagatacctttgaggaaggtagtgatgaaggcgaatacactgatgcg
gatgattttattgttgacgatgatggtagacctatcgcagagaaaagaaagaaaaagaag
ccaatattttctgatgcagcattgcaagaagcacaggacatttttggtgttgattttgat
tataatgaatttgataaatacggcgaagaggattatgaggaagaagaggaagaagaagaa
gatgaatacatggatgaagatgctgatattgaacggccgcggcgaccgaagaagcagttg
aagaaaaagaccacgaggaagagtatcttcgagatttacgagcctagtgaattgaaacgc
ggtcactttactgatatggataatgagatacgtactacagatataccagaaagaatgcaa
cttagatctgtaccagtcacatcagttcaggaaggttctgatgaactggatctcgaagca
gaatggatttacaagcaagcattttgcaaacctacagtctccattcaggatgcccacttg
aatgctgaggctaaggaacgagcacgaaaaggaccacagactatcggcaagatcaagaaa
gccttggattttatgcgcaatcaacactttgaagtcccttttatatctttctatagaaag
gagtatgtgctgcccgagttgaacattaatgacttgtggaaagtttataagtttgacgcg
aaatggtgtcagttgagccaacggaaagagaacctgctcaaactatttgataagatgcgc
aattatcaactggatgaaattatgaagaatccggacgcaccgttgccagataacgtgcga
gtgattaaagatgacgatattgagcgattgaagaacgtgcagacaagtgaagagctcaat
gatgtctataatcatttcatgttgtattatagtcacgagattcaggcgatgcaggaatcc
gtacgacagaaggagaagcaggcacgacgagaagagaggattcagcgacgtaaacaacaa
attgctgaggcagaagaaaatggagaagatccgccggaggaggaagaaatgccggaggaa
gaagaagtcgacgatacgctgaagcaagctgttagaagcggcccatactcaatctgtcga
aaagccggtttagatggtttagcgaaaaagtttggtctaacacccgaacactacgccgag
aatctgcgtgataattatcagcgtcacgaggtcgatcaggaaccaaccgaaccgacgaca
atcgcgaccgagtattccagttcgcgatttaaaactgcggaagaagtattgaaggctgct
cagctgatggtggcgattcagttggcacgcgagccgctcgtgcgtaaatgcgtgcgcgag
atgtacatggaacgcgctaagatgtctgtgaagccaacgaagaagggcattaaagagatt
gatgagaatcatccaatctacacaatgaaatatctgaaggacaagccggtgcgtgattta
gtaggtgttcaattcttgaatctgatgattgccgaggaggacaaactcattacgattaca
cttagtgatactattgagggtaacaccagcaataattatgtcgacgaaatgaagcagctc
tattgccgtgatgagttcagcaaacttgtacaagattggaatgccttgcgtgtaggcagc
gtcgaaatcgcccttaatcgcatggtaataccacatctaaagaaagagttgcgggcaaat
ttaatcgctgaggcgaaggaatgcgtgatgcgctcgtgttgccgtaagatgtacaattgg
attaaagtcgcgccgtacagctgtgagttccccgaagaagaggatgaggaatgggacacc
agtaaaggcctgcgcgtcatgggcttgtcttacgtgcctgattattcgcaggcagctttt
acttgtttgatcgcggctgatggagaatgtacagattacctgcgcttaccgcatctgatg
aagcgcaagaacagttatcgcgaaagcgaaaagacgctgaaggaggccgatttactagcg
ttaaagaactttatagccacgaagaagccacatgtgatcgtggtggctggcgagtctcgg
gaagcaatgatgatcgctgctgatatcaaggagtgtatcacgcatttatcggaagaagaa
cagtttcctaatatccaggtggagatatgcgacaatgaactcgccaagatctatgccaat
agtaacaaaggaaattcggagtttcgggattatccggaattgttacgtcaggctatttca
ttggcgagaaggatgcaggatccattagtagaattctcacaattatgcacggctgacgaa
gagattctctgcctcaaatatcacaatttgcaggatcagttacctaaggaagaactgctg
gaaaatctatatttggaattcgtaaatcgcgtgaatgaagttggcgtagatgtgaacaag
gcagtccaacaagcatactgcggcaaccttgttcaatttgtttgcggtcttggtccacga
aaaggtcaggcattgatcaagatgctgaagcaaacaaatcaacgattagagaacagaacg
cagttagttacagcatgtcatatgggaccaaaagtattcatcaattgcgctggatttatc
aaaatcgacactaatagtcttggtgacagtactgaagcgtacgtagaagtgctcgatggt
tcacgcgtacatcccgagacttatgaatgggctagaaagatggcagttgatgcactggaa
tatgacgacgaagacgccaatcctgccggcgctttggaggagatactcgaatcgccagaa
cgcttgaaagatttggatctcgacgctttcgcagaagaactcgagcggcaaggtttcggt
aataaatgcgttactctctatgatatcagagccgagttaaacagccgatacaaggatctc
cgtgtattatatcaatcgtcgagcgcggaaaaattgttcgatgttttgacaaaggaaaca
cccgagactttttacgtcggcaagctagtgttggctaccgtggtcggcatcagtcatcga
aaaccacagggcgatcaacttgatcaggcgaatccggtgcgaaatgaagagactggtctg
tggcaatgtcctttctgtctgaagaacgactttcctgaattatcggaggtatggaatcac
ttcgatgctggcgcttgtccgggtaaagctaccggcgtgagactgcgactggacaatggt
atctccggttatattcacatcaagaatctgtcggaccggcacgttgcaaacccctgcgag
agagtcggtatgggacaaatcattcattgccggatcattaaaattgaggtagaccgattc
agtgtcgaatgtaccagcaagagcagcgatctcgctgacaaaaatcatgaatggaggcca
cagcgagatccattttatgacaccgaatccgagcaaagagatataaaggtagaagaggat
gcgaagaaggcaaaacagcggcagatttatgtgaaacgcgttatcgtccatccatctttc
cataatatcagtttcgccgagactgttaaattaatgcagacaatgaagcaaggcgaagca
atagtgagaccgagtagcaaaggcgccgaccatttgacagtcacgtggaaagtcactgat
gacattttacagcatatcgacgttcgtgaagagggtaaagagaatactttttcattggga
caaagcctgtggataggcaacgaggaatttgaagatctagatgaaattatcgctcgacat
gtaaatcctatggccgcttatgcctccgaattgctggatttcaaatactataagtccact
gtagagggaatcaaggataaagcggaggagatactaaaagaacagaaaaaggagaatcct
aatggaattccatacatcatatcagcagctaagacttatcctggaaaattcttactctca
tatttgccgcgcactcgttgccgtcacgagtatgtcacagtgacatccgaaggcttcaga
tttcgggcgcagatgttcggtagagtaagcgatctattacgctggttcaaggaacatttt
agggatcccgttcctggacaatccactcctagtacaccgcgcggtgcgatgacttctaga
acaccttacactactacgccaggaacagtcagcggaatgaatcaagaagcaatacagcga
gttgcacagaatcttccacatcacatgttgcattcgttatcacaagtggcgaatcaaacg
ccacatcattatccgccacacaccccgggagcggctagtactaccggctatggcggagga
catacgtatcccaatacgccgtacacgccatctggtcaaactccgtttatgaccccgtat
cagacgccgcatcatacgccgcatcatagccagcccactcccagatacggtcaacaaacc
cctagccatcatcaagggccctttgtacatccaccgccgccctcgatgacacccagccat
cacagatctgctcaatcgcacagacctacaccgcccttgtctactccttccggtgatccc
atggattggaagaaggccgccgaagcatgggcacgtttaaaaagcggtcctcgagtctcc
ggatcgacgcctagatacgaagagtctagaaaaactccgcgtagctatgacgaatcatct
ggtagaacgacgccttccggaagaagtagaccttccacacgtactccatcatataaatct
ccgcgaggtactccacacacaaattctagtccacggagtatgtccctcagcggagatggt
actcctttatacgacgagagctaa
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integrated database retrieval system
