Acromyrmex echinatior (Panamanian leafcutter ant): 105144854
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Entry
105144854 CDS
T03917
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105144854
09122 Translation
03013 Nucleocytoplasmic transport
105144854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105144854
03041 Spliceosome [BR:
aec03041
]
105144854
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105144854
Spliceosome [BR:
aec03041
]
Complex C
Other components
EJC/TREX
105144854
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105144854
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
Thoc2
THOC2_N
Glyco_hydr_30_2
CTB
Motif
Other DBs
NCBI-GeneID:
105144854
NCBI-ProteinID:
XP_011052405
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
YANHNDCKFLTLFRCRHCIVSPKLPGRKVPALKSSLSPPSLCNLEDIHDYLLPMLIVLGP
NLHQDPILMYKVMRLCHSAIKHCSLDASKQPLNKNCSLYYDVLTILDVALLPSLSFMDCN
CCVAEELWNILKYYPYQNRYCLYARWKNDTPLQHAALLRKRADAQKKIKSIMKRVSKETI
KPVGRSIGKLTHSSPGVLFDYVLIQIQLYDNLIGPVVDSLKYLTNISYDVLGYCLVEALA
GADRDRFKHDGTSISLWLQSLASFCGAIFKKYNIELTGLLQYVANQLKAQKSLDLLILKE
IVQKMAGIEAAEEMTSDQLDAMAGGDLLKNEAGYFSQVRNTKKSSQRLKETLAEQDLAVT
LCLLMAQQKHCVVYRETDKSHLKLVGKLYDQCQDTLVQFGTFLGSTMTVDEYVERLPSIH
SMLQDNHIHADVAFFLARPMFAHAINIKYDALRKADPNYKKMSTAMKQLKYAEAAQTVMA
PVAQSVRPLHPLKVWEDISPQFLVTFWSLSMYDLYVPVESYQREVGKLKQLAVQTVDSKD
MNISKGKKEQERYTTLIEKLQDEKRKQEEHVEKVFAYLRQEKDTWFLSRSAKSAKNETIT
QFLQLCLFPRCTFTTVDAMYCAKFVHTIHSLKTANFSTLLCYDR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
tacgctaatcataatgattgcaagtttttaacattatttcgttgcagacactgtattgtt
tctccaaaattgccgggtcgtaaagtgcctgcattgaagagctctctctctccgccatca
ttatgcaatctagaggacattcatgattacttgttgccaatgctgattgtacttggacca
aatctgcaccaggatcctattctaatgtataaagtgatgagattgtgtcactccgctata
aaacactgttcacttgacgcgagcaagcaaccattgaataagaactgcagtctctattat
gatgttctgacgatacttgacgtcgcgctgctaccttctctttcctttatggattgcaac
tgttgtgttgctgaggaattgtggaatattctcaaatattatccatatcagaatcgctat
tgtctgtacgcgcgctggaagaatgatacacctttacaacatgctgcattgctgcggaaa
cgtgcagatgctcaaaaaaagatcaagtcgatcatgaagcgcgtgagcaaagaaacgatc
aagccagtaggccggtcaataggaaaacttacgcattcttcaccgggtgtactatttgat
tatgtcctcatacaaatccagttatatgacaatctcataggacctgtggtggattcttta
aaatacttgacaaatatttcatacgatgttttgggatattgtcttgtagaagcgttagcg
ggtgctgacagagatagatttaaacatgatggcaccagtatatccttatggttacaatct
ctagcttctttttgcggagcaatatttaaaaagtataacatcgaattaacagggttgtta
caatatgtagcaaatcaacttaaagctcaaaagagcctagatttattaatattaaaagaa
atagtacaaaaaatggctggtatcgaggccgccgaagaaatgacgtctgatcaactcgat
gctatggcaggcggagatctgttaaaaaatgaggccggttactttagtcaagtccgcaac
acaaagaaatcttcacagcgtttgaaggaaactctcgccgagcaagacctcgcagttact
ctgtgcctgttaatggcgcaacagaaacattgcgttgtttacagagagacggataaatct
catttaaaactcgttggcaagttgtacgatcaatgccaggatacgctcgtgcaatttggg
actttcttgggttcgactatgacagtagacgagtatgtggagcgactaccgtcgatccat
tctatgcttcaggacaatcacatacatgcagacgtcgcattttttttggcacggccaatg
tttgcgcatgccataaatataaaatatgacgctctccgtaaagctgatccgaattataag
aaaatgtccacggctatgaagcaattaaaatacgcggaagctgcgcaaaccgttatggca
cctgttgctcagtctgtcagaccgttgcaccctttaaaagtttgggaggatatatcgccg
caattcttagttacgttttggtctctgtcgatgtatgatttatacgtaccggtggagagc
tatcaaagagaagtcggcaagttgaagcaacttgcagttcaaactgttgattccaaagat
atgaatataagtaaaggaaagaaggaacaagaaagatataccactcttattgaaaagcta
caggacgaaaaaaggaaacaagaagaacatgtcgaaaaagtttttgcatacctgagacaa
gaaaaggatacatggtttttgtcacgaagcgctaaatcggcgaaaaacgaaacgataaca
cagtttctacagttgtgcctattcccgcggtgtacatttacaactgtagatgccatgtac
tgtgcgaaatttgtacataccatccactccctgaagactgcaaatttttcaactctgctt
tgttatgatcgt
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