Acromyrmex echinatior (Panamanian leafcutter ant): 105145252
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Entry
105145252 CDS
T03917
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aec03021
]
105145252
03036 Chromosome and associated proteins [BR:
aec03036
]
105145252
Transcription machinery [BR:
aec03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105145252
Chromosome and associated proteins [BR:
aec03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
105145252
SLIK complex
105145252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_Hrp3
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
105145252
NCBI-ProteinID:
XP_011052996
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MQKTFESESGKESGSDSENESKSDSSSSGSNSGSGSGSESDSSSSSGSGSGSGSDSEKSE
KSDAPAAQSDSFQSKGSNHSTEAKLRVKHESSREWDENPDIYGIRRSGRSRKEPDRLATN
RESDSDGRKKFKKKSSHNSWNSESSDSESDETENRRPPPSKSLNRRAAQKAKEKARVRKK
RISDSSDNSSFDSDDNRRQINRRAGTAVSYKEQSEEGTDSEDLVEVDESTAASTEPDNAE
TIEQILGQRMGKKGVTGNITTIYAVEDNGDPNPQDLSNLETEVQYLIKWKGWSHIHNTWE
SEESLKAQKVKGLKKLDNFIKRERVIEYTREHAEPEELDYLECQLELKQDLLKSYNNVER
IIADYKKPDSVYPDYFCKWENLSYAEATWEDGILIVKKWPEKIKEFCDREDSKRTPSKHC
KVLKSRPKFYQLNEQPTYMGKEKDLILRDYQMDGLNWLIHSWCKENSVILADEMGLGKTI
QTICFLYYLFHTQHLHGPFLLVVPLSTMTSWQREMSQWAPDINFVTYLGDINSRNVIREY
EWCYQDSKRLKFNVILTTYEIVLKDKTFLGALNWAVLLVDEAHRLKNDDSLLYKALTEFH
TNHRLLITGTPLQNSLKELWALLHFIMPSKFASWEEFEKQHDNAAQKGYSKLHKQLEPFI
LRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYEALRKGVKGSTTTFLNIVIE
LKKCCNHAFLTKPMDAEREKTNEDYLQQLIRGSGKLVLLDKLLVRLRDTGHRVLIFSQMV
RMLDILGEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLA
TADTVIIFDSDWNPQNDLQAQARAHRIGQKNKVNIYRLVTKKSVEEEIVERAKQKMVLDH
LVIQRMDTTGRTVLDKKNAGTNSNPFNKEDLNAILKFGAEDLFKDEEDGDEEPTCDIDEI
LRRAETRDEGPTTVGDELLSAFKVASFKTAFEEDLEPINQPNDNDDESKDWAEIIPENFR
RKIEEEEKSKEMEDLYLPPRSRKTLQQLNQSEGKGKKRKKVQDDSEDGEESGSEAEGSDD
DRPKKRGRPRVTPRENIKSFTDIEIRRFIKSYKKFPAPLKRLEDIAADADLQEKPMTELR
FLGEQLMSRCDACLVEFENTAKENKGGEEEGKGPGRKRGRGPTFKIGGVMVNAKSFSAAV
KELEPLEQALPSDPEQRANWHLDIKLKPANFECEWTSEDDVRLLKGIYQHGMGSWEAIKT
DTSLKLGDKIFPNGNKVQLKRVNARAEYLLKILKKQIDLKLGVTRMRKPRKPKEVKAITK
EIVEDNDSSGDENKKSKSKIDKSSIKKEDENVTKKDIKEEIDDVPDEKKKDKKVKKEKKD
NKKVKKNKQAAGPMHFTANNEPRAVDVIGELDPPVFDECKEKMRPVKKALKALDTPDMSL
SEEERVARARRSLYQIGNHIDTCLAEYKTPEQSKEWKSNLWYFASKFTTFKAKKLYRMYK
NLVKKKDGDSNGGATSSPDKKEDTSNTIKKHNEKVSHEKHFDKQQADSSNKDSRIMKRKI
DDIEENSNSSTQSKKHLSTISAVSSNISSTSTVTIGAITITPITSTPNSTSNTTNSADTS
RHKEQKESKHKDMKRDRDRDRDRDRGHDRGDRLSMNKDDRIRRDSGYNMGHYSGSREDDH
WLSRDGRDMRDSRYGFGDHKRDRFDLYGRMSGGYHRDRDRDRDRGMHMNDKRSDYYRYSS
GPPSYGYGPGSYGSSSGGGGGYPPTDIASSHFRSRGYAGDGYSNDWRPNKDYRRDYDRRP
PPPNANS
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacatttgaatccgaatctggtaaggaatccgggtctgattctgagaatgag
agcaaaagtgatagctcttcttccggcagtaacagcggatcaggatctggatctgaaagc
gactctagctcctcgagcggttccggttccggatcaggctccgactcggaaaagtcggag
aagtcggatgcacctgctgcacaaagcgatagcttccagagcaaaggctcgaatcacagc
accgaagcaaagcttagagttaaacatgagtctagtcgcgagtgggacgagaatcctgac
atatacggcattaggaggtccgggcgttccaggaaagaacctgataggctcgcaacgaat
cgcgaaagcgacagtgatggtcgcaaaaagtttaagaagaaaagttcacataattcgtgg
aattcagaaagttcagattcagaatctgatgaaactgagaatcgtagacctccacctagc
aaatccttgaacagacgcgcggcgcaaaaagcaaaagagaaagccagagtgcgaaagaaa
cgtatctctgattcttctgataattcttcctttgacagtgatgataatagaaggcagatt
aatagacgggcaggcactgcagttagttataaagagcaaagtgaagaaggtactgacagc
gaggatttggttgaagttgacgaatcgaccgctgcgtcaacagaacctgacaatgcggaa
actattgaacaaattttgggacagaggatgggcaagaaaggagttaccggcaacataacg
acaatctatgctgtcgaagacaacggtgatcctaatccacaagatctaagtaatctggaa
actgaggtacaatacttgatcaaatggaaaggctggtctcacatacataacacatgggaa
tcagaggaatctttaaaagcacaaaaagtaaaaggattgaagaagttagacaattttatc
aaacgtgaacgtgtaattgagtatacgagagagcacgctgagccagaggagttggattat
ttagaatgtcaattggaacttaaacaagatcttctgaaaagttacaacaatgttgagagg
attattgctgattacaagaaaccagactcagtatatcctgattatttctgtaaatgggaa
aatttgtcatatgctgaagctacatgggaagatggaattttgatagtgaaaaaatggcca
gagaagataaaggaattttgtgacagagaagattccaaaagaacaccgagcaagcattgc
aaagttctcaaatctagacctaagttttatcagttgaatgaacaacctacttacatgggc
aaggaaaaagatttaatattgagagattatcaaatggatggacttaattggttgatacac
tcttggtgcaaagaaaatagtgttatattagccgatgaaatgggtctcggcaaaacaatc
caaacgatatgcttcctttattatttatttcacacgcaacaccttcacggaccattttta
ttagtagttcctctgtcaactatgacttcctggcaaagagagatgtctcaatgggcacct
gatataaattttgttacttacttgggtgacatcaattctcgtaatgtcattagggaatac
gaatggtgctaccaggattcgaagagattgaagtttaacgtcattcttacgacgtatgag
atagtacttaaagataaaacatttttgggtgccttaaattgggcggtattgctagtagac
gaagctcatcgattgaagaatgatgattctttattatacaaagcacttaccgaatttcat
accaatcatcgtttattgattactggtactccattacagaatagcttgaaggagttatgg
gccttattacatttcattatgccttcaaaatttgcttcttgggaagaatttgaaaagcaa
cacgataatgctgcacagaagggatactccaagttgcacaagcaattagaaccatttatt
ctacgtcgagttaagaaagatgtcgagaaatctttgcctgctaaagtcgaacagatctta
cgagtagaaatgacatccttgcaaaaacaatattacaagtggatattgacaaaaaattat
gaagcattgcgaaaaggcgtgaaaggatctactacgacattcttgaacattgttattgaa
ttgaaaaaatgctgtaatcacgcctttctcacgaaaccaatggatgccgaaagagaaaag
actaacgaagattatttgcaacaattaattcgcggttctggcaagttagtgcttctagat
aaattactagtgagattgcgcgacacgggacatagagtactgatattcagtcaaatggtc
agaatgttggatattcttggtgaatatctacaaaggaggcatttcccattccaaagatta
gatggaagtataaagggggaattaagaaaacaagcgttggatcacttcaatgctgaggga
tcgcaagatttttgttttctattgtcgacgcgagccggtggtctcggcattaatcttgcc
actgcagacactgtgataatttttgattctgactggaatccgcaaaatgatttgcaggca
caagccagagcacatcgaataggacaaaagaataaggtaaatatttatcgattggttact
aaaaagtcagtcgaggaagaaattgttgaacgtgcgaagcaaaaaatggtcttagatcat
ttagtgatacagcgaatggatacaaccggtaggacagtgttagataaaaagaacgcagga
accaatagtaatccatttaacaaagaagatttgaatgctattttaaaatttggcgctgag
gatttgttcaaagacgaagaagatggagatgaggaaccaacttgcgatattgacgaaata
ttaagaagagctgaaacgagagacgaaggaccgacaacggttggcgatgaattgttgtcc
gctttcaaagtcgccagttttaaaacagcatttgaagaggatttggaacctattaatcag
ccaaatgataacgatgatgaaagtaaagattgggccgaaatcattccggagaattttcga
aggaagatagaagaggaggaaaagtccaaagaaatggaggatctgtatctaccaccgaga
agtcgaaaaactcttcagcaactcaatcagagcgaagggaaaggcaaaaagcggaaaaaa
gtacaagatgacagtgaggatggcgaggaatcgggtagcgaagcggaaggaagcgacgat
gataggcctaaaaaaagaggtagaccgagagttacgccgcgcgagaatatcaagagtttt
actgatattgagatacgacggttcatcaagagttataaaaagttcccagcgcctttaaaa
cgattagaagatatcgcagctgacgctgatttacaagaaaaaccgatgacagaattgcgc
ttcttgggcgagcaattgatgtctagatgcgacgcatgtttagtagaatttgagaatacc
gcgaaagaaaataaaggtggcgaggaagaaggcaaaggaccaggtcgtaaaagaggtcga
ggacccacttttaagataggtggtgtaatggtgaatgcaaagtcattctcagccgctgtt
aaagaactcgagcctttagaacaagctttgccatctgatcccgaacaacgtgctaattgg
catctcgatattaaattgaaaccagctaatttcgaatgcgaatggacttctgaggatgat
gttagactattaaagggtatatatcagcatggcatgggttcatgggaggcgataaaaaca
gatactagtttgaaactcggcgataagatttttcccaatggcaataaagtacaactcaaa
cgtgtgaatgcacgtgcggaatatctcttgaagattttgaagaaacaaattgatcttaag
ttaggagtgacgcgaatgaggaaaccgagaaagcccaaagaggtgaaagcaattaccaaa
gaaattgtagaagataacgatagctctggtgacgaaaataaaaaatcaaaatccaaaatt
gacaaatcttcaattaaaaaagaagatgaaaacgttacaaaaaaagatatcaaagaagaa
atcgatgatgtacctgatgaaaagaaaaaagataaaaaagttaagaaggagaaaaaagat
aacaaaaaggtgaaaaagaataagcaagccgcaggtcctatgcattttactgcaaataat
gaaccaagagctgtcgatgtaattggtgaattagatccgccagtatttgatgagtgcaaa
gaaaagatgagaccagtaaagaaggcattaaaggccttagatacaccagatatgtctctg
agcgaagaagagcgagttgctcgcgcacgtcgaagtctttatcaaattgggaaccatatc
gacacatgtctggcggaatataaaacccctgaacaaagcaaagaatggaaaagtaatctt
tggtattttgcttccaagtttacgaccttcaaagcgaaaaagctttacagaatgtataag
aatctagtaaaaaagaaggatggcgacagcaatggcggtgccacatctagtcctgataaa
aaagaggatacttctaatactataaagaaacacaatgaaaaggtatctcacgagaaacat
ttcgataagcaacaggcagacagcagtaataaagatagcagaataatgaaacgtaaaatt
gatgatatcgaagaaaactcgaatagcagtacgcaaagtaagaaacatctttcaactatt
tccgctgtcagcagcaatatcagcagcacatccacagttactatcggtgctattacgatt
acgcctataacgtcaacgccaaattccacatcgaataccactaacagcgcagacacatcg
cgacataaagagcaaaaagagtcgaagcataaagatatgaaaagagatagagatcgtgac
agagatagagatagggggcacgacagaggtgatagattaagtatgaacaaggatgataga
attaggagagacagtggatataatatgggacattatagtggtagtagggaagatgatcat
tggttatccagagatggaagagatatgagagacagcaggtacggattcggagatcataag
cgcgatcgcttcgatctttatggtcgcatgtcgggtggttatcacagggacagagacaga
gatcgagatcgtggtatgcacatgaatgataaaagaagtgattattatcgatactcgtcg
ggaccaccgagttacggatatgggccaggtagttatggaagtagcagcggtggtggtggt
ggttatccgcccacggatattgcatcaagtcatttcagaagtcgtggttatgcaggagat
ggttactccaatgattggcggccgaacaaagattacaggcgggactacgatagaagacca
ccgccaccaaatgccaactcctag
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integrated database retrieval system
