Acromyrmex echinatior (Panamanian leafcutter ant): 105145300
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Entry
105145300 CDS
T03917
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105145300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aec03021
]
105145300
03041 Spliceosome [BR:
aec03041
]
105145300
03036 Chromosome and associated proteins [BR:
aec03036
]
105145300
Transcription machinery [BR:
aec03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105145300
Spliceosome [BR:
aec03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
105145300
Complex B
105145300
Complex C
U2 SnRNP specific factors
105145300
Chromosome and associated proteins [BR:
aec03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
105145300
TFTC complex
105145300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
105145300
NCBI-ProteinID:
XP_011053057
UniProt:
F4WHN1
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYLYNLTLQRATGITHAVHGNFSGSKMQEILVSRGKSLELLRPDPNTGKVHTLLTVEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYISAKNIFEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHTVGVDVGFENP
MFACLEIDYEEADSDPTGDAAVKTQQTLTLYELDLGLNHVVRKYSEPLEEHANFLVSVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTVPVAASMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDEMDSLSPIMACQVADLANEDT
PQLYIACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVKRRIDEEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSALGEDALVQVYPDGIRHIRADKRVNEWKAPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKMPSEVMCMALGNVAVGEQ
RSWFLAVGLQDNTVRIISLDPSDCLAPRSMQALPAAAESLCIVEMGAKDADNSEDAAPQQ
SSLYLNIGLQNGVLLRTVLDPISGDLADTRTRYLGSRPVKLFRIRMQGNQAVLAMSSRSW
LSYYHQNRFHLTPLSYESLEFASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LEYTPRKFAIHTDSAHLVVIETEHNAYTEETKQQRRQQMADEMQEAAGAEEAAVARELAE
AFMSEEPNEAVFGAPRAGPGLWASMLRLMAPTTGETFEVHRFEQNLAALCLCLVKFANQG
DQLFLIVGVAKEFQLNPRVSNGGFLYTYKVNPDCTSIELLHKSPLDEVPLAICPYQGRVL
VGVGRMLRLYDMGKKKLLRKCENKHIPNAVVSINAIGQRIYVSDVQESVYAVRYKRQENQ
LIVFADDTHPRWITTTCVLDYDTVATADKFGNIAVIRLATGINDDVDEDPTGNKALWDRG
LLNGASQKADTVACFHVGETVMSLQKATLIPGGSESLVYTTLSGTVGVLVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSIEPTKQKSISGDLERT
PSEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtacaatctgaccctccaacgtgccacgggcatcacgcacgcagtgcacggt
aatttctccggcagcaaaatgcaggagatcctcgtctcccgtggtaaatcgttagagttg
ctgcgaccggatccgaatacgggaaaagtccacactctgttgaccgtcgaggttttcggc
attattcgatctctcatggcgttcagacttaccggcggaacgaaggattatattgtcgtt
ggatcagattctgggcgtatagtaatattagagtatatttctgccaagaacatctttgag
aaggtacatcaggagacttttggcaaaagtggatgtagacgcatcgttcctggccaatat
cttgccatcgatccaaaaggaagagcagttatgataggtgctatcgaaaaacagaaactt
gtgtacattcttaacagagacgccgaggcccgtcttacaatctcttctccattggaagct
cataagagcaacacactagtttatcatacagttggtgtcgacgttggtttcgagaatcct
atgtttgcgtgtttagaaattgattacgaggaagccgacagcgatcccacgggtgatgca
gcagtgaaaacgcagcaaactcttacgctgtatgagcttgatcttggtctgaaccacgta
gtgcggaagtacagtgagccattagaagaacacgctaacttcctcgtgtctgtacctggc
ggtaatgacggcccaagtggtgtgctcatttgctccgaaaactatcttacatacaagaat
ctcggggatcagcatgacatacgttgtccgatcccgcgacgccgtaatgatttagacgat
cccgagagaggaatgatatttgtgtgttcggctacacataaaacaaagagcatgttcttc
tttttggcacagacggagcagggtgatatcttcaagattactctcgaaacggacgaagac
atggtcactgagatcaagctgaagtacttcgatactgtacccgtagcagcgagtatgtgc
gtcttgaaaacgggattcctgtttgtcgcctcggaatttggaaaccattatctgtatcaa
atagcgcatctcggagacgacgatgatgagcccgaattcagttcagcgatgccgttagaa
gaaggagacactttcttcttcgccccgcgaccgcttcgaaatctagtattggtcgatgaa
atggacagtctgtcgcccataatggcttgccaggtagcagatttggcgaacgaagatacg
ccgcaattgtacatcgcttgcggacgaggaccgcggtccacattgcgagtgttacgccac
ggtctcgaagtttctgagatggccgtgagcgagctgcctggtaatccaaacgctgtttgg
accgtgaaaagaagaatcgatgaggaatatgatgcatacatcatagtctccttcgtgaac
gccacactcgtactcagtatcggcgagactgtcgaggaagtgacggactcgggttttctc
ggtacaacaccgaccttgagttgctccgccttaggcgaggacgcattggtgcaggtatat
cctgacggtatacgtcacatccgagcggataagcgtgttaatgaatggaaggcacctggc
aagaagacgatcgtaaaatgtgcagtcaatcaacgtcaagttgtgatcgccctcactggg
ggagaactagtctacttcgagatggatcctaccggacaattgaacgaatatacggaaaga
aaaaagatgccctcggaagtaatgtgcatggccctcggaaacgttgcagttggcgagcaa
cgttcatggttccttgctgtcggtctgcaggataatacagtgaggataatatcgttggat
ccctcagattgtctagctccaagaagcatgcaggcgttaccagcagctgcggagagttta
tgcatcgtggaaatgggcgccaaagatgccgacaattccgaggatgcggcgccacagcaa
tccagtttgtacctgaatataggtttgcagaacggtgtgttgcttagaactgtattagat
cctatttccggagatctcgcagacacaagaacacgctacctaggctctcggcccgtgaag
ctcttcagaatacgaatgcagggtaatcaggcggtgttggcgatgagcagccggtcctgg
ctgagttattatcaccagaatcgttttcacttaacgcccctatcatacgagagtcttgaa
ttcgcgtcgggcttcagttccgagcaatgtccagagggtatcgtcgccatatcgacaaat
acactgaggatcttggcgctcgagaaactaggggccgtgttcaatcaagtgagcttccca
ctggagtacactccgaggaagttcgcgattcatacagattctgcgcacttagtagtcatc
gaaacggaacataatgcttacacggaggagacaaagcaacagagaagacagcagatggcg
gatgaaatgcaagaggcggctggcgccgaggaagcggctgtcgctagagaattggcggaa
gccttcatgtcggaggagccaaacgaggcggttttcggtgctccgcgagctggcccggga
ctgtgggcttccatgctgagactaatggcaccgaccaccggggaaacattcgaagtgcat
cgtttcgagcaaaatctagccgcgttatgtctttgcctcgtaaaatttgctaatcaaggt
gatcagctgtttctcatcgttggagtcgcgaaggaatttcaattaaatcctagagttagc
aatggcggttttctttacacatacaaagtaaatccagattgtaccagtattgagctactg
cacaaatctccgttagatgaagtaccgttagccatttgtccgtatcaaggccgagtacta
gtcggcgtgggtagaatgttacggctttatgatatgggtaaaaagaaattactgcgtaag
tgcgagaacaagcatattccgaacgcagtcgtatccataaacgcaatcggccaacggatc
tatgtcagtgacgtacaggaatctgtatatgcagtgagatacaagcgtcaagagaatcag
ttaattgttttcgcggacgacacacatcctagatggatcacaacgacatgcgtattagat
tacgacaccgtcgccaccgccgacaaattcggaaatatagctgtgatacgattagcgact
ggcattaatgacgatgtggatgaagatcctaccggaaacaaggctttatgggatagagga
ttgttgaatggcgccagtcaaaaagcggacacagtggcgtgtttccacgtcggcgagaca
gtgatgtcattgcagaaggcgactctcatacccggtggttccgagagtttggtttacacg
accctaagtggaacagtaggtgtgctcgtgccattcacaagccacgaggatcatgatttc
ttccagcatctggaaatgcacatgcgatcagagcaccctcctctgtgtggcagggatcat
ctgtccttccgatcgtactattaccctgtaaaaaatgtcatcgacggtgatctctgtgaa
caattcaactcgatcgagcctactaaacagaagagcatctctggcgatctcgagagaaca
ccgtccgaggtgtcaaagaagctagaggacatacgtacgcgttacgctttctaa
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integrated database retrieval system
