KEGG   Acromyrmex echinatior (Panamanian leafcutter ant): 105145904
Entry
105145904         CDS       T03917                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
aec  Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:aec00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105145904
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aec03019]
    105145904
   03041 Spliceosome [BR:aec03041]
    105145904
Messenger RNA biogenesis [BR:aec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     105145904
Spliceosome [BR:aec03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105145904
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_WDHD1_1st WD40 WD40_Prp19 WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_LRRK2 EIF3I Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_like Beta-prop_WDR19_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_IFT140_2nd Beta-prop_SCAP PQQ_3 Beta-prop_IFT122_1st DUF2202 Beta-prop_Vps41 Beta-prop_EIPR1
Other DBs
NCBI-GeneID: 105145904
NCBI-ProteinID: XP_011054105
LinkDB
Position
Unknown
AA seq 332 aa
MEKMIESTDKKLLYNTVLSQTFSPDGNYLLAGNIYGDISIFDLSKALGPNKENELQGPSY
RFAAHPDQEVACMLSVENFLVTGTRGEISGWDWKIVTSNKALKSKVSWNIQIPANKDSYE
KPDINYMLYSKMNNLLYVGCGDNNIYVINLENRKILRSMQGHTDYIHCLAMMDNQLASCS
EDGSVRLWDLRKRENTNILTPHLIDKVARPRLGKWIGAVDFTEDWLLCGGGPSLSLWHVR
TMEVATIFDLADQGIHVAEIYEERVIAGGTTDHVHHMTYQGDILAKVPTSSLTVYSVVHQ
EIPHKVLSVAGSSNCIDISTNYNYREMMLKFA
NT seq 999 nt   +upstreamnt  +downstreamnt
atggagaaaatgatagaatcgactgacaagaaattactttacaacaccgtgctatcacaa
acattttcacccgatggaaattatcttctggctggcaatatttatggggatatctcaata
tttgatctgtcaaaggccttagggcctaacaaggagaatgaattacaaggacctagttat
cgctttgctgcacatcccgatcaggaagtcgcatgtatgctttctgtggaaaattttctt
gtgacaggaacacgtggtgaaatatcgggatgggattggaagatagttacatcgaataag
gctcttaagagtaaagtatcatggaatatacaaattcctgctaataaagacagttatgag
aagccagacataaattacatgctgtattcaaaaatgaataatttactgtatgttggctgt
ggtgataataatatttatgtcataaacttagaaaacaggaagattctgagaagcatgcag
ggccatactgattacatacactgccttgctatgatggataatcagcttgcatcctgtagc
gaggatggttctgtgagattatgggatttgcgcaaaagagagaacactaatatattaacg
cctcatttaatagataaagtcgctcgaccacgacttggaaaatggattggtgctgttgat
ttcacggaagactggttgctgtgtggcggtgggcctagtttatcattgtggcacgtacga
acgatggaggtagcgacaattttcgatttggctgatcaaggaatccatgtagcagagatc
tatgaagaacgcgtaatcgctgggggtacgaccgaccatgttcatcatatgacatatcaa
ggcgacattctagccaaagttcccacctcgagtctcacagtctatagcgtagtacatcaa
gaaataccacataaagtgctcagtgtggctggctcttcaaattgtattgatattagcaca
aactacaattaccgcgaaatgatgctcaagtttgcgtaa

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