Acromyrmex echinatior (Panamanian leafcutter ant): 105146064
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Entry
105146064 CDS
T03917
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aec03000
]
105146064
Transcription factors [BR:
aec03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105146064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_WDHD1
HMG_box_2
NOCA1_C
HVO_2142
Motif
Other DBs
NCBI-GeneID:
105146064
NCBI-ProteinID:
XP_011054406
LinkDB
All DBs
Position
Unknown
AA seq
856 aa
AA seq
DB search
MSTLGRLRMSSKRKSPPTKLSEGGGGAGTVAGANEEEEDTTSPVAGSGGEAAVVVGEEGA
TTPVDIEECYSHQRGGECESSGCSSPATTSEPDLRDSPSPSLNSLRTAKRQRLLFLSSQE
TITPYHHPHHHHHHHHHHHHHTNTSSSSGGALEPASSSECGSPPTLLSVDPYYSHHPHHN
NNNNNVTQNNNNNNNGSGTTAAGSKRSMDDVLKRLTCKMNSESLSIQDDTTNTRRTSPPL
SSTPTGHNAHSCSGSTTTTVANNVALSPPDSGRISNTEAQVDQDGVAALHRILCAESFAE
KERRLSEMILQLQLLRERLVQQQDQSKSYPAHMTVDSQKQIEMQRLQTEHLKRQQEHIMQ
HNIQELQAQMTKSQLSMSGPQSLMFLPFLEQLRGLPVQSPMPPPPATSTATTGNKHINSI
ANMISSHREGPSWATAHLAQMTTQMEKESSSPAPISSAVAPTAPPLQDLDAPLNLTKPKS
TSSGATASSSSPGSDSHSTGAGSSGQQEQPLAATAPKLFPPGLPIPRNYLPTLPYAGLPP
HLSSLSSPMGKVMAKDEAGGPGGSVAAAAVAAVEKHFAMHGLYGLPSNTGGMPPSAQTQR
PIKHSGSREEPPQEEQDFLSTPHMWRDPGYKVAEDITEKAKMVRQQKREGENKPHIKRPM
NAFMVWAKDERRKILKACPDMHNSNISKILGARWKSMSNSEKQPYYEEQSRLSKLHMEKH
PDYRYRPRPKRTCIVDGKKMRISEYKSLMRQRRQEMRQLWCRDGGTEMNFLSPVSADMTG
TQHHPGTGAGPSARPSVSPPATMLNGGGGAAGPSSDHPSFYYPQDSLSPTDMMNFSPENS
GSIGGYDASPRHHDED
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcttggcagactgaggatgtcctcaaagaggaagtcgccaccaacgaagcta
tcggagggcgggggcggtgcgggtacagtggcaggcgccaacgaggaggaggaggacact
acctcgccggtggctggttccggtggcgaggcagccgtcgtcgtcggtgaggagggtgcc
accacccccgtcgacattgaggagtgctactcccatcagagaggcggcgagtgcgagtcc
tccggctgctcatcgccggcgactaccagtgagccggatctacgcgactcgccgtcgccc
tcattgaattccttgcggacggccaagcgacagaggctgttgtttctgtcgagccaagag
accatcacaccgtatcaccatcctcatcatcaccatcatcaccaccaccaccatcatcac
catacgaacacgtcgtcgtcgtcgggtggtgcactggaaccggcgagctcctcggagtgc
ggctcgccacccaccctcctttccgtcgatccttattactcccatcatccacatcacaat
aacaacaacaacaacgtcacgcagaacaacaacaacaataataacggcagtggtactacc
gctgcaggcagtaaaaggtccatggacgacgttcttaaaagactaacgtgcaagatgaat
agcgaatccttgtctatccaggacgataccaccaataccaggcggacatcaccgccgctc
tcttccacgccaaccggtcacaatgcacatagttgcagtggaagcacgactaccaccgtg
gcaaataacgtggcactatcacctccggattctggaaggatatcaaacacggaggcgcaa
gtagatcaggacggcgtggcggcccttcataggatcctttgcgccgagagcttcgccgag
aaggagcgccgactatcggagatgatcctgcagctgcagttgcttagggaacgtcttgta
caacagcaggatcaatcgaagtcgtatcccgctcacatgacggtcgactcgcagaagcaa
atcgagatgcagcggctgcaaacggagcacttgaagcggcagcaagagcacatcatgcag
cacaacatccaggagttgcaggctcagatgacaaagagccagctgagcatgtcggggccg
cagtcactgatgtttctgccgtttctcgaacagctcagagggctgccagtgcagtcgccc
atgcctccaccgccagccacgtcaaccgccaccaccggcaacaaacacatcaactccatc
gccaatatgatcagcagccatcgagaaggtccaagctgggcgaccgcgcatctcgctcag
atgaccacgcaaatggagaaggaatcgtcgtcgccggcgccgatttcatccgcggtagca
ccaacggctccgcctcttcaggatctcgacgccccactgaacctcaccaagccgaaatcg
acgtcctcgggcgccacggcgtcttcttcgtcgcctggtagtgactcgcactcgaccggt
gccggaagcagcggccagcaggagcaaccattagcggcgaccgcgcccaaactttttccg
ccaggactgccgataccgcggaattacctgccgacgcttccttacgctggtctaccacca
catctcagcagtctgtcttcgccgatgggcaaggtaatggccaaagacgaggccggcgga
ccgggaggatccgtggcggccgctgcggtcgcggccgtggaaaagcacttcgcgatgcac
gggctgtacggattgccatcgaacacaggtgggatgccaccgtcggcccagactcaaaga
ccgatcaagcattctggctctcgggaggaaccgcctcaggaggaacaggattttctctcg
acgcctcacatgtggcgagatccgggatataaagtagcggaagacataacggaaaaagct
aaaatggtgaggcagcagaaaagggagggtgagaacaagccacatatcaagcgacctatg
aacgcattcatggtgtgggccaaggacgaacgtagaaagatcttgaaagcctgcccagac
atgcacaactcgaacatatcgaaaattctcggcgcccggtggaagtcgatgtcaaactcg
gagaaacagccatattacgaggaacagtcgcggctttcgaagttgcacatggaaaagcac
ccagactacaggtaccggccgcggccaaagcgcacgtgcatcgtggacggcaaaaagatg
cgtatctccgagtacaagtcgctgatgcggcagcggcggcaggagatgcggcagttatgg
tgccgtgacggcggcactgagatgaacttcttgtcaccggtaagtgccgatatgactggc
acgcagcatcacccgggcacgggcgccggtccgtcggcgcgaccatcggtctcgccgccg
gcgacgatgctgaacggtggtggcggtgctgccggcccaagttcggaccatccttcgttc
tactatccacaggacagtctgtcgcccacggacatgatgaacttctcacccgaaaattct
ggctcgatcggcggctacgacgcgagtccacggcaccacgatgaggattga
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