Acromyrmex echinatior (Panamanian leafcutter ant): 105146400
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Entry
105146400 CDS
T03917
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aec03009
]
105146400
Enzymes [BR:
aec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105146400
Ribosome biogenesis [BR:
aec03009
]
Eukaryotic type
Pre-60S particles
Helicases
105146400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
GerA
Motif
Other DBs
NCBI-GeneID:
105146400
NCBI-ProteinID:
XP_011054919
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MTRFRYVCGFMESSHNINQDFKIYSKMKDDDLIGFADLNTVSDNDEDNEIASIKKKIFKK
SGGFQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPL
FEKLKVRQAKTGARALILSPTRELALQTLKFIKELGRFTGLKSAVILGGDSMDNQFSAIH
GNPDIIVATPGRFLHICVEMDLQLKNIEYIVFDEADRLFEMGFGEQIQEIVNRLPESRQT
LLFSATLPKILVDFTKAGLSDPVLLRLDVESKLPEGLTLSFITCRPEEKLAVLLSLLKRI
IKPDSQIIIFAETMHHVEYIHQILDKADISNTFIYSNLDPSARKINAAKFQIGKVRVLIV
TDVAARGIDIPHLDCVINFNFPAKSKLFVHRVGRCARAGRVGTAYNIVSSDEYPYLLDLH
LFLGRPLTIVPTTETDESMEYAVGKLPQAMVEEELAELINWHNISTDLINMRKVCNNAYQ
QYVRSRPNASAESVKRIKELRINEAGILPQYTDASHINTADIISRMKNYRPQGTIFEIGT
KTNSTDYQVMKTKRIFHKENILNFRKKMEEHKIDKINMASELSQKVNLPSSNTEEINAAF
RTVVVPKKRTSDDLYKLSKKKKRLTKRDEEYYIPYSAPDKHTEDGLAVNTFATEADKAQM
DLTADNEDGQHLQMQLKKWDRKKKKMVTVERDPKAKKIRTESGAWIPATYKTNRYNVWKE
KSKIDENDSADDSEEEPSQSKNLRTTANTHWARHNQKLKDKIKIKNELKRPEQILKARKL
LEKKRQKNGRKRNKGQKNRRKH
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtttccggtacgtctgtggttttatggaaagcagccataatatcaatcaagac
tttaaaatctacagcaagatgaaggacgatgatcttattggatttgctgatctgaataca
gttagtgacaatgatgaggataatgaaatcgctagtattaaaaagaagattttcaagaaa
tctggagggtttcaatccatggctcttagttttccaatattaaaagggatcctcaaacgt
ggatacaaaatacctacacctatacaaagaaagactataccattggctctcgagggaaga
gatatagtagcaatggctagaacaggtagtggaaagactgcttgctttttaattcctctg
ttcgaaaaactcaaggtgaggcaagcaaaaacgggtgcacgtgcattgatactatcgcct
acacgtgagctggcactacagacattaaagttcataaaggagttaggaagatttacagga
ttaaagtcagcagtgatattgggaggtgacagtatggataatcagtttagtgcaattcat
ggaaatcctgacatcattgtagctactccaggtagatttctgcatatatgtgtggagatg
gatctgcagttgaaaaatattgaatacattgtttttgatgaagctgatagattatttgaa
atgggttttggggaacagatacaagaaattgtaaatagattaccagaatcacgtcagaca
ctattgttttctgctactttgcctaagattctagtagattttacaaaagctggtttaagt
gatccagttttacttcgtttggatgttgagagtaagctgcctgaaggattgacattatct
tttattacgtgtcgccctgaagaaaaattagctgtacttctaagcttactaaaaagaatt
attaagcccgactcgcaaataattatatttgcggaaactatgcatcatgtagaatatatt
catcagatattagataaagcagatatatctaacactttcatttattcaaatctggatcct
tctgcgcgtaaaataaacgcagctaaatttcaaatcggtaaagtgagagttctcatagta
acagatgttgccgctagaggaatagatataccacatctagattgtgtaattaattttaat
tttcccgcaaaatctaaactcttcgtacacagagtagggcgatgtgctcgagctggacgt
gttggaacggcatataatattgtgagctcggatgaatatccttatcttttagatttgcat
ctttttcttggtcgacctttaacaatagtgccaactacagaaactgatgaaagtatggaa
tatgctgtaggaaaattgccacaagccatggtagaggaagaattagctgaattaataaat
tggcacaatatctctactgatctgataaatatgcgaaaagtatgcaacaacgcctatcag
caatacgttaggtcacgaccaaatgcttcggcagaaagtgtcaaaagaattaaggagctt
cgcataaatgaagccggcattttaccccagtatactgatgcttctcatattaatacagcg
gatataatatccaggatgaaaaattatagaccgcagggaacgatatttgaaattggtacg
aagacaaattcaactgattatcaagtaatgaaaacgaaacgaatatttcacaaggaaaat
attcttaatttccgtaaaaagatggaagaacataaaatcgataaaatcaatatggcatca
gaattatctcaaaaggtcaatttaccatccagcaacacggaagaaattaatgctgcattc
aggactgtcgtagttccaaagaaaagaactagtgacgatttatacaaactttcaaagaag
aagaaacgtttaacgaaacgggatgaagaatattatataccttattctgcaccagataaa
catacagaggatggtttagcagttaacacgtttgccactgaagctgataaggcgcagatg
gatttaacagcagataatgaagatggtcaacatcttcaaatgcaactgaaaaagtgggat
agaaaaaagaagaagatggtcaccgtcgagagggacccgaaggcgaaaaaaatacgcact
gaatcgggagcatggatacctgctacatataaaacaaatcgttataatgtgtggaaagag
aagagtaaaatcgatgaaaacgatagcgcagatgatagtgaagaagaaccttcacaatcg
aaaaatttacgaactactgcaaatacgcattgggcgcggcacaaccagaagcttaaagac
aagattaaaataaagaacgagctgaagcgacccgaacaaatcttgaaagcacgcaaactt
ctagaaaaaaaacgccaaaaaaatggcagaaaaagaaataaaggtcaaaagaaccgtagg
aaacattaa
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