Acromyrmex echinatior (Panamanian leafcutter ant): 105146418
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Entry
105146418 CDS
T03917
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aec03016
]
105146418
Enzymes [BR:
aec01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
105146418
Transfer RNA biogenesis [BR:
aec03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
105146418
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
TSEN34_N
EFL1
Motif
Other DBs
NCBI-GeneID:
105146418
NCBI-ProteinID:
XP_011054950
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
IDWLKLRRDHRIIGELVGSFPKLTRQEIFLGLPLLLLPEEVTLLLEKKIACLVECTNLKT
QPDESLNQRFQEYRDKLFLEQGNCLKDNRKKQITSVMDKIIEGKKRKMLGLHTSKKNMRK
PLDKKMQEALNNIEIDTESLLEEELAKLPKLKKSDALVQIHTAYPWSNKDDVKIVEWKYP
LTSDQQLKYKIYKDLWERQYYITSGEKFGGDFLVYPGDPIMFHSQYIIQCKRADEEIPIM
DVIAQCRLSCHVRKTLVFATYHEEEDIVKYQSFQWTECNALEDS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atagattggttgaagcttcgacgggaccacagaataatcggcgaattagtgggctctttt
ccaaaattaactagacaagaaatatttttaggtctcccattgcttttattgccagaagaa
gtcactctactgcttgaaaagaaaatcgcttgtcttgtagaatgtacgaatctaaagaca
cagccagatgaatcattaaatcaaagatttcaggagtatagagataaactgtttctggag
caaggaaattgtctaaaagataatagaaagaaacaaattacttctgtgatggacaagatt
atagaaggaaaaaaacgcaagatgttaggcttgcatacaagcaaaaagaatatgaggaaa
ccattggataagaaaatgcaggaagccttgaataatattgaaatcgatactgaaagtttg
cttgaagaagaattggctaagttgcccaaactgaaaaaaagtgatgcactcgttcaaata
catacagcatatccatggtctaataaagatgatgtaaaaatagtggaatggaaatatcca
cttacatctgatcagcaacttaagtataagatatataaagatctttgggagaggcaatat
tacatcaccagtggagaaaaattcggtggcgattttctggtatatccaggtgatccaata
atgtttcattcacaatatatcatacaatgtaaacgtgcggacgaagagatacctatcatg
gatgttattgctcagtgcagactcagttgtcatgttagaaaaacattggtgtttgctacg
tatcacgaagaggaagatatagtgaaatatcaatctttccagtggacagaatgtaatgca
ttagaagacagctga
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