Acromyrmex echinatior (Panamanian leafcutter ant): 105146721
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Entry
105146721 CDS
T03917
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105146721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aec03021
]
105146721
Enzymes [BR:
aec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105146721
Transcription machinery [BR:
aec03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
105146721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
ParcG
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
FAM198
AcetDehyd-dimer
Motif
Other DBs
NCBI-GeneID:
105146721
NCBI-ProteinID:
XP_011055469
LinkDB
All DBs
Position
Unknown
AA seq
1656 aa
AA seq
DB search
MVKEQFRETNVASEVSHISFGVDSMHDINMQASVEMISKNLYNEDTKHTPALQGALDRRM
GVSSTGVECETCNKKLNDCVGHFGYLNLELPVFHVGYFKSIIQILQTICKSCAHVLLTHG
ERKFFSRSIQNPKSGYLMRKALRKKILEVARKKTVCPNCKSNNGPVKKAGFLKIVHEKYK
NLKKTDPIIQEKLTELTPKIERDTEFKNIVEQNYRCVFDKYLYPNVVQELFNRIPTGDIC
FLLMNPGCATPVDLVLRRIPVPPICIRPSILSDLKAGTNEDYLTMKLSEIALINDVIRKQ
KGVNINTYMEQWDFLQLHCGLYINSEMSGIPLHMQPKKSGRGIVQRLKGKQGRFRGNLSG
KRVDFTSRTVISPDPNLRIEQVGVPIHVAKTLTYPERVIPSNMELMRKLVRNGPDTHPGA
NYIQYKNSQNRRYLGYGDRNKAAQDLQYGDIVERHLKDDDLVLFNRQPSLHKLSIMTHRT
KVLEHRTFRFNECVCAPYNADFDGDEMNLHLPQTEEARAEALVLLANKSNLVTPRNGDLL
IAATQDFITGAYLLTQKDTFLQIEQARLALCLLAGSDASMKVTLPPPAIIKPARLWTGKQ
IFSLIIRPNKECSVKANLKAKGKTYTNGKEFCINDSYVIIRNSELLAGTMDKSILGSGSK
QNIFYILLRDWGEDVATAAMWRLTRITNHFNFERGISLGIGDLIPSQGLLRAKERILNTH
YSTCNEYIQLMEQGHLVCQPGCSEEETLETRILNELSVIRDDVGKACLKELHPTNTPLTM
ALCGSKGSFINISQMIACVGQQAINGCRVPDGFENRALPHVLTRSKKPDAKGFVENSFYS
GLVSKEFYFHAMGGREGLTDTAVKTAETGYMQRRLIKSLEDLCIHYDMTVRNSMRDMIQT
TYGGDGLDPTYMEGKDCPVDYERVYEHVRAKMPYITEEPLDYASVINATKEMLRSEEYEC
LSEEFKDELTSFLKLKVARKIAFYRQNIISNSSVTSQLERFTVSQLVEFIHTCKEKYMRA
KIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVAAMNITQGVPRIKEIINASPKISTPII
TATLINDANSEIAEQVKARIEKTTLGDVSEYIEEIYLPDDHFLIIKLDINRIKMLKLEID
VNSVCYKLCTSKLKLTSKNVEKVTDSVIIIRPNRSKDKDSNFPFRQLTEAIPNVIIKGLP
SINRVVVHNENLGSKSKFTLFVEGDNFREVMATRGILGEKTKSNNTIEVFKTLGIEAART
TIMSEIKSVMENHGISIDCRHLMLLADLMTSRGEVLGITRQGLAKMKESVLNLASFEKTA
DHLFDAAYYGQKDVISGVSESIIMGIPVPLGTGIFKLLHKADKDEPCKKELLFDDPQFHK
PLHSGKRLPRIQPRPLLQTFEFRIEKKISSIGMVNEKEFWTEVRKDIPRYKKKKPRVVPA
FTIQALQENTIVAKPPRCGLYKPRLPKPSTFRKFYKRGIFPISLENNGYDQKINWKVDIE
DLDFHHYLPLFFDGLTETEQPYKFLAEQGISDMLEHGGPKILPVVPQLIIPIKNALNTRM
PEIICSTMKAIQRLVRSADCVGETLVPYFRQILPIPNLLKDRNVNLGEGIDYSQQRGENA
ADIIQETLEILEKYGGEDAFINIKYMVPTYESCMMN
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagaacagttcagggagacaaatgtcgccagcgaagtctcccatatatccttt
ggagtagacagcatgcacgacataaatatgcaggccagtgtggagatgatctctaaaaac
ctgtacaatgaagatacaaagcatactcctgctttgcaaggagcactggacaggcgcatg
ggagtgagttctacaggagtcgaatgcgaaacatgcaataaaaagttgaatgattgtgta
ggacatttcgggtatcttaatttagaattaccagtttttcacgttggttacttcaaatct
atcatccagattttacaaacaatttgcaagagttgtgctcatgttttgctaacgcacgga
gaaaggaaatttttttcacgcagtatacaaaatccgaaatcgggatatttaatgcgcaaa
gcattacgtaagaaaatattggaagtagcgagaaagaagacggtatgtccaaattgtaag
tcaaataatggccctgtgaagaaagctggttttctcaagattgtacatgagaaatacaag
aacttaaagaaaacagatcccattattcaagaaaaattgactgaattgaccccaaagata
gaacgcgacacagaattcaaaaatatagtagagcaaaactacagatgtgtatttgataaa
tatttatatccaaatgtggtgcaagaacttttcaatagaattccaacgggcgatatctgc
ttcttgttaatgaatcctgggtgtgcaaccccagtagatttggtattgagaaggatccct
gtgccaccaatttgtattagacctagtattttatctgacctaaaggctggtacaaatgaa
gattatctgacaatgaaattgtcagaaatagctcttatcaatgacgtcattcgcaagcaa
aaaggtgttaatataaatacatacatggaacagtgggattttcttcaactgcattgtggt
ctttacattaatagtgaaatgtccggaatacctctacacatgcaacctaaaaagtctggt
agaggtatagtgcaaagattgaaaggaaaacaaggtcgttttcgaggtaatttgtctggt
aaacgtgttgattttacttctcgcacagtcatttcgcctgatccgaatctcagaatagaa
caagttggtgtacctatacatgttgcaaagactttaacgtatcctgaaagggtcattcca
tcaaacatggaattaatgcgaaaattagtaagaaatggtccagacacacatcctggagca
aactacatacaatataagaattcgcaaaacaggcgataccttggatatggtgatcgaaat
aaagccgcccaagacttacagtatggcgacattgttgagaggcatctcaaagacgacgac
ttagtgctgttcaatcggcaaccatctttgcacaaattaagtattatgacacatagaacc
aaggtattggagcatcgaacatttagattcaacgaatgtgtctgtgcaccttacaatgca
gattttgacggcgacgagatgaatcttcacttaccgcagactgaagaagccagagccgaa
gcgttagttttattagcgaataaatctaatctagttacacctcgcaatggtgacttattg
atagcagcaactcaagattttatcaccggtgcttatcttttaactcaaaaagacacattt
ctccaaatagaacaagctagattagctctttgccttttagctggttcggatgcttctatg
aaagtaactcttcctccgcctgcaatcataaaaccagcaagattgtggactggcaaacaa
atatttagtctcattatacgaccgaataaggaatgttctgtcaaagcaaatctaaaggca
aagggcaagacatataccaatggaaaagaattttgtattaatgattcttatgttattatt
cgcaattccgagcttctagcaggaacaatggataaatctatattgggctcaggatcaaaa
caaaatatattttacattctgctacgtgattggggtgaagatgttgcaaccgcagctatg
tggcgtttaaccagaataacaaatcacttcaattttgagagaggaatttctcttggtatc
ggtgatcttatacctagtcaaggccttcttcgagcgaaggaaagaatattaaacactcat
tattctacatgtaacgaatacattcaattaatggaacagggtcatcttgtctgtcaacct
ggatgttcagaagaggaaacactggaaacgagaatattaaacgaactttcagtgatccgt
gatgatgttggtaaagcgtgtttgaaagaattgcatcctactaatactcctctaactatg
gcactctgtgggagtaagggtagtttcatcaacatctctcaaatgatcgcttgtgtaggt
cagcaagctatcaacggatgtagagtgccggatggatttgagaatcgtgcgttacctcat
gtcttgacacgatcaaagaagccagatgctaaaggctttgtggaaaattcattttattct
ggattagtgtccaaggaattctattttcatgcgatgggcggtcgagagggtctcacagat
accgctgtaaaaactgcagagactggatacatgcagagacgattaattaaaagtttagaa
gatttgtgtattcattacgacatgacagtacgcaattctatgcgcgatatgatacagact
acatatggcggtgatggattggatcctacgtacatggagggtaaagactgtcccgtggat
tatgaaagagtatacgagcatgtgagagcgaaaatgccttatattaccgaagagccttta
gattatgctagcgtaattaatgccacaaaagaaatgctacgctctgaagagtatgagtgc
ctgagtgaggaattcaaagatgaattgacttcgttcctgaaattgaaagtggcacgaaaa
atagcgttttatcggcaaaacattatatcgaattcatcagtgacttcgcaacttgaacgt
tttaccgtctcacaattagtagaatttattcacacgtgcaaagagaagtacatgagagct
aagatagaaccgggtactgctgtaggtgcgctcgccgctcaaagtatcggtgagccaggg
actcagatgacactcaaaacattccattttgctggtgtagctgctatgaacattactcaa
ggagttccccgtattaaagaaattattaatgcgagtcccaagatcagtactcctatcata
acagcgacattgatcaatgatgcgaattccgagattgccgagcaagtgaaggcacgaatt
gagaagacgaccctgggagatgtatctgaatatatcgaggaaatatatttgcctgatgat
catttccttataataaaattagatatcaatagaattaaaatgttgaaattagaaattgat
gttaattccgtatgctataaactctgcacttcaaaattgaaattaacttcaaagaatgta
gaaaaggtgaccgactcagttattattattcgaccaaatcgaagtaaagataaagactca
aattttccatttcgtcaattgacagaggccattccaaatgttataataaagggtttacca
tcgattaatcgagtagttgtacataatgaaaacctcggtagtaaatcgaaatttacatta
tttgtcgaaggtgataattttagagaagttatggcaacacgtggcatcctcggtgagaag
acaaagtcgaataatacaatagaagttttcaaaacgctcggaatagaagcagcgagaacg
actatcatgtcagaaattaaatcggtaatggaaaatcacggtatcagtattgattgtcga
catttaatgctcttggcagatttaatgactagtagaggagaagtactcggtatcacgaga
caaggtttggcaaaaatgaaagaatcggttttaaatttagcatcgtttgagaaaactgca
gatcatctatttgatgcagcttattatggacaaaaagacgttataagcggcgtatcggaa
tcaattataatgggtattccagttccactaggcacaggaatattcaagctgcttcacaag
gcagacaaagacgaaccatgcaaaaaggaacttttatttgatgatccacaatttcacaaa
ccattgcattctggaaaacgacttccacgaatacaaccgcgtccactattgcaaaccttt
gaatttagaattgaaaaaaagatatcgagtatcgggatggtgaatgaaaaagaattttgg
acagaagttcggaaagatataccacgatacaaaaagaaaaaaccacgagtagttcctgcc
ttcactattcaggcgttgcaggaaaacacgatcgtcgcgaaaccgccgcgatgtggacta
tataaacctcgtctaccgaaaccatcgactttcaggaagttttacaagcgcggtatattc
cctatctctttggagaataacggttacgatcagaaaattaattggaaagtggacatagaa
gatttagattttcatcattatttgccactgttcttcgatggattaacggaaacggaacaa
ccgtacaaatttctggcagagcaaggaatatcagatatgctagaacatggtggaccaaag
atattacctgttgttcctcaattgattattcctattaagaatgctttgaatacaagaatg
cccgagataatttgttccacgatgaaagcaattcaacgtttagtgcgatcagccgattgc
gttggtgaaactttagtcccatattttagacaaatcttgcctattccaaatttacttaaa
gatagaaatgtaaaccttggcgaaggtatcgattattctcagcaaagaggagagaacgct
gctgacattatacaagagacacttgaaatcttggaaaaatatggtggcgaagatgctttc
ataaatattaaatacatggttcccacctacgaatcctgtatgatgaattaa
DBGET
integrated database retrieval system
