Acromyrmex echinatior (Panamanian leafcutter ant): 105146881
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Entry
105146881 CDS
T03917
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105146881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105146881
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
105146881
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
105146881
NCBI-ProteinID:
XP_011055796
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MDDSPPRVAPEGEDDFEIQSSAQMANVDHVELVENWDYEANASQNDDIEVEKKDGPSVRL
IPGYATFEDYIQDAFDTMRTGIKTANNLPAGDNFNYYACFPSFNDARQKDKERILATMKS
IMKLVGGSGNIQNRDIDEKFDLLLETNDQLLDQANILMDEESGILRNPQVELVVSQMPKP
VVNGTWNIKTNQVSDNSEKVRLLGGKNIQRPQLMFKDKIDNSSKPWMPRIKDKPNSLKPL
ALHVEEDEHGEVFNHPYEFELDKFETLECQLKKRIPVEYKLLDDTNFVFIDKPADINILL
EDLRNHKEIAVDLEHHSYRTFQGITCLMQISTIQTDYLIDTLSLRSELYQLNEIFTKPSI
LKVFHGADMDILWLQRDLSLYVVNMFDTHQAAKQLNLPYLSLAYLLNKYCGIDPNKHFQL
ADWRIRPLPLELMKYAREDTHYLLYVKDMLKNELIDAANGKSNILKAVYDQSTEICKRTY
VKPIWTEESCMNMYRKSQKSFNNKQIYALLELHRWRDLTARQEDDSIGYILPNHMLLNIA
ETLPREMQGILACCNPIPPLVRQNLLKIHKIVLKAREQPLVKSIAEQDIRQRPTQQNHTD
TGASLYIPHDVPSGTEARADLPCLLNKNIVKSELSEANKCQTIKHTITIFDSPVISEDEE
TKGSKNGNKKKIIFISPFMRYRCVIPMVMDQEAKEREEQQKKEETEKEEKRLTMKSQNEC
VNETEINESKNRVYEHFKQISQKNVQAEVQLKKKKKSDSILNLVRRQKKRKLDTGNESQK
KNDGNDFSTSTSHLNSKTVHVSKKAKQKTLKVIKEQKLQESLTQVQSDNRNSVTIKSIRA
KKKGDKKVNEEMLRKQGLLPSKKFDYKSVDFSSFQGGSTQSSANRTQFQQPRQKKKEKRF
QKWKKQKLNI
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggatgactctccacctcgtgttgctccagaaggagaagatgatttcgagatacaatcg
agtgcgcagatggcaaatgtggatcatgtagaacttgttgaaaattgggattatgaggcg
aacgcctcgcaaaacgatgacatagaagtcgaaaagaaagatgggccgtcggtccgtctt
attcctggatatgcaactttcgaagattacattcaagatgcatttgatacgatgagaact
ggaatcaaaacagctaataatctgcctgccggagacaatttcaattactatgcttgcttt
ccaagctttaatgatgccagacagaaagataaggagagaatactggctacaatgaagagc
ataatgaaattagtaggaggttctggtaacattcaaaaccgagatatcgatgaaaagttc
gatcttttattggaaacgaatgatcaactactagatcaagctaatatattgatggatgaa
gaaagtggtattctacgaaatcctcaagtagaattggttgtatcacagatgccaaaacca
gttgtgaatggcacttggaatataaagaccaaccaagtctcagataattcagagaaagta
cgattgttgggtggaaaaaatatacaaagaccacagttgatgtttaaggataaaattgat
aatagttcaaagccatggatgcctcgaattaaggataaaccaaactctctgaagccattg
gctcttcatgtcgaagaagatgaacatggcgaagtctttaatcacccttatgaatttgaa
ctagataagtttgaaacactggaatgtcagttaaagaagagaatacctgttgaatataag
ttgttggatgataccaattttgtattcattgataagccagctgatatcaacattcttcta
gaagatctgagaaatcataaagaaatagctgtggacttggaacatcactcttatagaacg
tttcagggcataacttgtttaatgcaaatatcaacgatacaaaccgattacttaattgat
actttgagcctacgatcagaattatatcaactgaacgagatttttacaaaaccttcaatc
ttgaaggtctttcatggtgctgatatggatattttgtggctccaaagggatttgtcgctg
tacgtagtgaacatgtttgacacccatcaagctgcaaaacagctcaacctaccctatctc
agtttggcttatctattaaacaaatattgtggcatagatcccaacaaacattttcaatta
gccgactggcgtatacggcctttaccattagaactaatgaaatatgcgagagaagataca
cattacttgctttatgtaaaagacatgctgaaaaacgaattgattgatgcggctaatggc
aaaagcaatatcttgaaggctgtgtatgatcaaagcactgagatttgtaagcgcacgtat
gtgaaaccaatttggacagaggaaagttgtatgaacatgtacaggaagagtcaaaagtct
ttcaacaataaacagatatatgcgcttttagaattgcacagatggcgagatctcacggca
aggcaggaggacgacagtattggctatatattaccgaaccacatgctactcaatatagct
gagacgctgccacgtgaaatgcagggtattctagcatgttgtaatccaattccgccatta
gtgcgacaaaacttactgaaaatacacaagatagtactgaaggctagggagcaaccgctt
gtaaaatctattgctgaacaggacattcggcagagaccgacacaacaaaatcatacggat
actggagcttccttatacataccgcatgatgtaccaagtggtacagaagcaagagcagat
ttgccatgtcttttaaacaagaatattgtgaaatcagaactctcagaggcaaacaagtgt
caaaccatcaagcatactataacgatattcgattcaccagttatatcagaggacgaagaa
acaaaaggtagtaagaatgggaataaaaaaaagattatattcataagtccgtttatgaga
tacagatgtgtcataccaatggtaatggatcaggaagcaaaagaacgagaggaacaacaa
aagaaagaagaaacagaaaaagaagaaaagagattgactatgaaaagccagaatgaatgt
gtaaacgagactgaaattaacgagagtaaaaacagagtttatgaacattttaaacaaata
tctcaaaaaaatgtacaagcggaggttcaactcaaaaagaaaaagaagtccgatagtatt
ctcaatttagtacgtagacaaaagaagagaaaattggatactggaaatgagagtcaaaaa
aagaacgacggcaatgatttttctacatcgacatcgcatttaaatagtaaaactgtacat
gtgtccaagaaagcaaaacaaaaaacactgaaagtgatcaaagaacagaagttgcaagag
agtcttacacaagtccagagtgataatagaaattctgtaacaattaaatcgataagagct
aagaaaaaaggtgacaaaaaagtgaatgaggaaatgttgaggaaacagggtttgttacca
tcaaaaaaattcgattacaaatcagtagactttagcagtttccaaggtggcagtacacaa
agtagtgcaaatcggactcagtttcagcaacctcgacaaaagaagaaggagaaacgcttc
cagaagtggaagaagcaaaaacttaatatatga
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