Acromyrmex echinatior (Panamanian leafcutter ant): 105147089
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Entry
105147089 CDS
T03917
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105147089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aec03400
]
105147089
DNA repair and recombination proteins [BR:
aec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105147089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ARM_CUL7_CUL9
PilJ
Motif
Other DBs
NCBI-GeneID:
105147089
NCBI-ProteinID:
XP_011056156
UniProt:
F4WMY7
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MPKVNTILNYFTSPKTIKKLETAKEEREKSQTPKRDLKNKGFVKNGKENQNTDDKKRSYK
KDTEEEEDEPIKPKRRRLIIPDVDSDEDSGDEFKPGSESEESESVSEGDTEQEPSTEEET
PEKKRKTSSVKFKSKQANSRNTKANKKDLKQPSQPVQSQIISNGLNTAHTWPHLKLDFLR
PEKIRDIHRRMPNDPDYDSKTLYVPTEFLINQTPAMRQWWELKSKHFDCVFFFKIGKFYE
LYHMDAVIGVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARVEQTENPEMMAA
RCSKMTKPTKFDKVVKREICQVSTRGTRVYTPLDVEASTPNSNYLLSLVEKCNFNSTISS
FGVCFIDTTIGEFYLGQFVDDRCNSRLLTLLAHHPPIHVIYERSNLSQKTLQLINNTLPA
VLKEPLQREAQFWSATTVLKKLHEGSYFKKEKDSSFAWPEGLKPYLNEGDSLGLTPADNK
ELAVHALGGCVCLLKEFLLEQQLLAQGCFNTYIPPDFSTANSRTGLNYANNMVIDAVTIK
NLRLFGEGSLINILDHCCTAFGKRLLREWVCRPSCRKTVIIERQEAVQELLDRMDVMQSA
RIILSTLPDLERLLSKIHAQGNAAKMKNHPEGRAIMFEGPTYSKRVIVDFTTTLAKFEEV
LKFIELFDDFKSNLITRYTQYEPNGDFPRLRETLDYFKTAFDHEEAKKQGYIVPKKGVDA
EYDSVLTELADIKKDLDKYLEKQKQHFGVKITFHGTDRKRYQIEIPESQVKKVGPGYELQ
SQRKGFKRYYTAEAKELLTRQMNAEEHKDKVLKDLNRRIFAQFSEKYDMWHAAVYKLATM
DVLISLADYARNGDMCIPEIHDGSDGEIFIKIKDGQHPCIVSDNFIPNDTLLATDGTASF
MILTGPNMGGKSTLMRQMGLITIMAQIGSYVPASSCCMTLVDRIFTRLGANDDILAGQST
FLVELSETATILQRATPYSLVLLDELGRGTSTYDGTAIAAAVVDALTKLKCRTLFSTHYH
SLVEDYKTNEEVTLAHMACMVETEEEEEVSQETVTFLYKLSEGACPKSYGFNAARLAGVP
SVITKRAHEIASRMEQETNHKHIFNALCKANGVRMRSLIATI
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagtaaatacaatacttaattatttcacatccccgaaaactatcaaaaagtta
gaaacggcaaaggaagaacgagaaaaatcgcaaactcctaagagagatctaaagaacaaa
ggatttgttaagaatggaaaagaaaaccagaataccgatgataagaaaagatcatataag
aaagatactgaggaagaagaagatgaaccaataaagcctaaaagacggcgtcttattatt
cctgatgttgactctgatgaagattctggagatgaattcaaaccaggttctgaatctgaa
gaatctgaatcagtttctgaaggagatacagaacaagaaccttcaacagaggaggagaca
ccagagaaaaaaaggaagacatccagtgttaaattcaagtcgaagcaagcaaattctcgt
aatacaaaggcaaacaaaaaagatttgaaacagccttcgcaaccagttcaaagtcaaatt
ataagcaatggacttaacactgcacacacttggcctcatttgaaattagatttcttgcgt
ccagagaaaataagagacatacatagaagaatgccgaacgatccagattatgattctaag
acactctacgtacccactgagtttttaattaatcaaactcctgcgatgagacagtggtgg
gaattaaaaagtaagcactttgactgtgtatttttctttaaaatcggtaagttctatgag
ttgtatcatatggatgcagttattggtgtcaacgagctcagtcttacatatatgcggggt
gaattcgcgcattctggatttcctgaaattggatatggtcgttattcggcgagtttaata
gagagaggatataaagtcgcacgagttgaacaaactgagaatccagaaatgatggcagcg
cgttgtagcaaaatgactaaaccgacaaagttcgataaagtggtgaaacgtgaaatttgt
caggtcagtaccaggggtacgagagtatatacgccattggacgtggaagcatctacgcca
aactccaattatctattatccttggtcgaaaagtgcaatttcaattcaacgatcagctct
tttggagtatgctttatagatacaacgataggtgaattttatctcggccaatttgtcgat
gatcgctgcaactcgagactattgactctattggctcatcatccaccaattcatgtgata
tacgaacgcagtaatttatcgcaaaagactctgcaacttataaataacactctaccggca
gtgctaaaagagccgcttcagcgcgaggcacaattctggtctgctactactgtgctgaaa
aaacttcatgaaggaagttacttcaaaaaagagaaggactcgagttttgcatggcctgag
ggtctgaaaccgtatttaaacgaaggagacagcttgggtttaacaccggcagataacaaa
gaattagcagtacacgcacttggaggatgcgtgtgtttgttgaaggagttcttactcgaa
caacaattattagcgcaaggctgcttcaatacatacattccgccagatttttcaaccgcg
aatagccgtacaggtcttaattatgcaaacaacatggtgatagatgccgttacgataaaa
aatctaaggctcttcggagaaggttcactcattaatatattggaccattgttgcactgca
ttcggcaaaagattgctgcgcgaatgggtttgcagaccatcttgtcgcaaaaccgttatt
atagagcgccaagaagctgtacaagagttgctggatcgaatggacgtgatgcagtcggct
cgcataattttatcaactctgccagacctcgaaagacttttgagcaagatacacgctcaa
ggaaatgctgctaaaatgaaaaatcatccggaaggtagagccataatgtttgaagggccg
acatattcgaagagggtgatcgtagatttcactacgacactcgccaaattcgaagaagtg
ttaaaattcatcgaactgtttgatgatttcaaaagtaacctgataactcgctacacccag
tacgaaccgaacggtgatttccctcgtttaagagagacattagactattttaagaccgca
ttcgatcatgaagaagctaagaagcaaggctacatcgttccaaagaaaggagttgacgct
gaatatgattcagttctgactgagcttgcagacatcaaaaaagatctagacaaatacttg
gaaaaacaaaagcaacatttcggcgtaaaaataacgttccatggaacagataggaaacgt
tatcaaattgagattcccgagtcgcaagttaagaaagtcggtcctggatacgaattacag
tcacaaaggaaaggcttcaaacgttattataccgccgaggcaaaggaacttttgacaaga
caaatgaatgccgaagagcataaggacaaggtgttgaaagatcttaacaggcgaatattc
gcgcagttcagtgaaaaatacgatatgtggcatgcggccgtttacaaattggccaccatg
gatgtgctcatctccctcgcggattatgcgcggaacggcgatatgtgtatcccggaaatt
catgatggatccgatggcgagatattcatcaagataaaagacggacaacatccttgcatc
gtgtctgacaactttataccgaacgacactttattggcaaccgacggtaccgcctctttc
atgattctgacgggaccgaacatgggaggcaaatcgactcttatgcgccaaatgggccta
atcacgatcatggcgcagataggcagctacgttccagccagctcgtgctgcatgacgctg
gtggaccgtattttcacgcggctgggcgcaaacgacgatattttggccggccagagtacg
tttttggtcgagctgagtgaaaccgctacaatactgcaacgcgctacaccctattcgctg
gtacttctcgacgagttgggacgtggcacgtcaacttatgatggtacggcaatagcggct
gcggtcgttgatgcattgaccaagcttaaatgtcgtacattattctcaacgcattaccat
tctctagttgaagattataaaactaacgaagaagtcacgttagctcatatggcatgtatg
gtggaaactgaagaggaagaggaagtgtcgcaagagaccgtgacgtttttgtacaagctc
agcgaaggggcatgtccgaaatcctacggattcaatgccgctcgattggcaggcgtaccg
tctgtaatcacaaagagagctcacgagatagctagtaggatggagcaggaaactaatcac
aagcacatctttaatgctctttgcaaagccaacggtgtcagaatgagaagtctcattgct
accatttaa
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