Acromyrmex echinatior (Panamanian leafcutter ant): 105147339
Help
Entry
105147339 CDS
T03917
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03040
Spliceosome
aec04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105147339
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105147339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aec03041
]
105147339
04121 Ubiquitin system [BR:
aec04121
]
105147339
03400 DNA repair and recombination proteins [BR:
aec03400
]
105147339
Enzymes [BR:
aec01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105147339
Spliceosome [BR:
aec03041
]
Complex B
Other components
Prp19 complex
105147339
Complex C
Prp19-CDC5 complex
105147339
Ubiquitin system [BR:
aec04121
]
Ubiquitin ligases (E3)
U-box type E3
105147339
DNA repair and recombination proteins [BR:
aec03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
105147339
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Prp19
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
DSE1_N
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_EIPR1
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_Vps41
NBCH_WD40
Beta-prop_HPS5
ASA1
PAC11
Beta-prop_RIG_2nd
Beta-prop_WDR41
eIF2A
Beta-prop_DCAF4
Tricorn_2nd
U-box
Beta-prop_Nup120_160
B-prop_COPA_B_2nd
Beta-prop_VPS8
Beta-prop_ACSF4
Beta-prop_WDR35_TULP_N
PAS_11
RMC1_N
WDR54
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
105147339
NCBI-ProteinID:
XP_011056574
UniProt:
F4WNN4
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MALSCAISNEVPEHPVISPVSGSIFERRLIEKYVTENGVDPISGKELTIEQLIDIKATPI
VKPKPPSATSIPAILKIMQDEWDAVMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIVQATIPQPAVAVEAGGTATQPMEQAGITEDVIQKLQERAT
VLTQERKRRGRSVPEDLMPQDSIRSFQTLASHPGLHSASVPGILALDIHNADTSKILTGG
ADKNATVFNKDTEQVVAILKGHTKKVTRVIYHPEEDVVMTASPDTTIRVWNVATSQTTLL
LKAHDAPVTGLSLHPTGDYLLSSSLDQHWAFSDIRTGRLLTKIAGQAGQPLTTAQFHPDG
LIFGTGTADSQVKIWDLKEQSNVANFPGHTGPITAISFSENGYYLATAAEDSCVKLWDLR
KLKNFKTLQLEESYEVKDICFDQSGTYLAVAGTDVRVYLCKQWQELKVLNDHTAAATGVR
FGKHAQYIASTSMDRTLKLYGLS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcgctatcttgtgcgatttctaatgaagtaccagagcatccagtaatatctcctgtc
tctggctcaatatttgagagacgtctcatagaaaaatatgtgactgaaaatggagtagat
cctattagtggcaaagaacttaccattgaacaacttattgatatcaaagcaactccaatt
gtcaagcccaaaccacctagtgcaacttctattccagcaatattaaaaattatgcaagat
gaatgggatgctgttatgttgcattcatttacattacgacagcaacttcagactgcaaga
caggaactgtctcatgctttatatcaacatgatgcggcttgccgtgtgattgctagattg
actaaggaagttactgctgctagagaggctcttgctactctcaaaccacaagctggaatt
gttcaggctacaattccgcaaccagctgtggcagtagaagctggtggcacagcaacacaa
ccaatggaacaagctggtatcactgaagatgtaatacagaaacttcaagagcgagcaact
gttcttactcaagagcgaaaaaggcgtggacggtcagtaccagaagatcttatgcctcag
gacagtatccggtcattccaaactctcgcatcacatcctggacttcactctgccagtgtg
cctggaattctagcacttgatattcacaatgcagatactagcaagattttaacaggtggt
gctgataagaatgccactgtttttaacaaggatactgaacaagtagtggcaatccttaaa
ggacacacaaaaaaagttacacgagttatttatcatccagaggaggatgtagtaatgact
gcgtcacccgatactacaattcgtgtatggaatgttgctaccagtcaaacaacattatta
ttgaaagctcacgatgcacctgtgactggattgtctttacatccaactggcgattatcta
ctgagttcctctctagatcaacattgggccttttcagatatacgtaccggcagattatta
actaaaattgcaggacaagcaggacaaccgttgacaactgcacaattccatcctgatggt
ttgattttcggcactggcactgcggattctcaggtgaaaatctgggatttaaaagaacaa
tctaatgtagcaaactttccgggacacactggtccaatcacggcgattagtttttccgag
aatggatattacttggcaacagctgcggaagattcatgcgtcaagctttgggatttgcgt
aaattgaagaacttcaagacattacaattggaggaatcttatgaagtgaaggatatttgc
tttgatcaaagtggaacttatttggctgtggcaggaacggatgtcagggtatatctctgt
aagcaatggcaggaattgaaagtcctaaatgatcacacagccgctgccactggcgttcgt
tttggaaagcatgcacaatatatcgcgtctactagtatggatagaacattaaaactgtac
ggattatcataa
DBGET
integrated database retrieval system
