Acromyrmex echinatior (Panamanian leafcutter ant): 105147654
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Entry
105147654 CDS
T03917
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aec03041
]
105147654
Enzymes [BR:
aec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105147654
Spliceosome [BR:
aec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105147654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
R3H
Helicase_C
DEAD
Ank_2
Ank
nSTAND3
AAA_19
HA2_N
Ank_4
AAA_22
Ank_5
PhoH
ATPase
UvrA_inter
NPHP3_N
AAA_7
AAA_14
AAA_11
SRP54
Motif
Other DBs
NCBI-GeneID:
105147654
NCBI-ProteinID:
XP_011057121
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MLRRKQQRHRPIGEDTRIAVNLTVKKLLSSPDQKELEFPSSYTAEERAYIHELARELGLK
SKSRGKGTNRFLTVYKREGSTIVQADAVIKLQKHSKQGIYNLMQTFPLNHKECQDLLPPI
ERERPLNNDVNTNTKAMGRLNNSIPQVPQLKTNFDVLQFRKSLPIFNAREEILSALNNHQ
VIIIAGETGCGKTTQVPQYILEHYQQKHQPCRIICTQPRRLSAVSVAERVAFERDEKIGQ
TFGYQIRLESRVAPKTLLTYCTNGVLLRTLMGGDSALTTLTHIIVDEVHERDRFCDFLLI
ALKDALVKYRSLKLILMSATMDTSIFAKYFNKCVVINVPGRSYDVDVYFLEDILKMTGYM
TKEMLVKKKEFLKWKDKQKTLESWKQYKPQHSNKSIKSEKSLLPAPILAQQSDPIPEKIK
LEPWLIEEMDKSIFDAWVNGREDNFAQLLHFILSENVSVDYQHSETFITPLMAAAARGCI
NTTEQLLNLGANLNLRSANDWTALDWAKSRNHTECAELIEAYMKTYDCAVPNNELAHVTE
TSLSEEDKLLLDIYHHTFNDDNIDYDLLLELVFYIHLKMPAGSILIFLPGYDDIVTMKEK
INAEDKKMNQGLRYNLFVLHSNMQTCDQKKVFKPSPQGTRKIILSTNISETSITIDDVVY
VIDSGKVKEKSFDAISSVCTLTSNWISQACAKQRKGRAGRCRRGICYRLFSSIRYNNMQA
YQTPEILRLPLQELCLYTKHLTSGNTPIAEFLDKALEPPSNVVTRNAVQLLKTIDALDPW
EDLTELGSHLLDLPIEPRLGKMLLYAVVLKCLDPILTIVCSLAYKDPFILPSQPSQKRAL
TAARKKFATATYSDHMVVLRAFQGWQNARATGKERAFCEKNFISAPVMEMVVGMRTQLLG
QLRASGFVRARSPGDIRDLNSNSENWAVVKAALTAGLYPNLIRVDREHMQLRTQKEVKVF
FHPSSTLRDYPKSSRMTSAQTHCTNVQSLPCDWLLYEEMSRTGRFCHVKIVTAVNPLTVA
LFSGPARLPMDVIYEAEAVPESESDSEVDEFHEGTIFKLDDWVVFKLDPEAAQLFLHLRQ
KWNALFLRRMKAPNKAMSALDEKVINTLVTVITNEEQACGLQQPAGIGQRPRPLIVDYYP
ANVRRDDYSERYF
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaaggaaacaacaaagacatcgccccatcggggaagatacccgaatcgcagtg
aacttgactgtaaaaaaattgttgagcagcccggatcagaaggagctggagttcccatcg
tcgtacacagcagaggagcgggcgtacatccatgaattggctagagagctgggcttgaag
tcaaaaagtcgaggaaaaggtacaaatcgtttcttgacagtgtacaagagagaaggttca
acaatagttcaagctgatgctgtgataaaattgcaaaaacattcaaagcagggtatatat
aatttaatgcagactttcccattaaatcacaaggaatgccaagacttgcttcctccgatc
gaaagagaacgccctcttaataatgatgtaaatacaaatactaaggctatgggaaggtta
aataacagcataccacaagttcctcaattaaaaactaattttgatgtgctgcagtttcgc
aaatctctgccaatttttaacgcgagggaggaaattcttagtgcattaaacaaccatcaa
gtaatcataatagcaggtgaaaccggatgtggcaaaactacacaggtgccacaatatatc
ttggaacactatcaacagaagcatcaaccttgtagaatcatttgcacacaacccaggcgt
ttgtcagcagtatctgtggccgagagagtagcgttcgaaagggacgaaaaaatcggtcag
actttcggatatcaaataagattggaaagtagagtagctcctaaaactcttctaacgtac
tgcacgaatggagtattgcttaggactttaatgggcggcgattccgccttaactacgctc
acgcatattattgttgatgaggttcacgaacgtgacagattctgcgactttcttttgata
gctttgaaggatgcattagttaaatatcgttccttgaagctgatacttatgagcgccaca
atggatacttctatctttgctaagtatttcaataagtgcgtagtcattaacgttcctggt
cgatcatacgacgtggatgtatactttttggaggatattttgaaaatgaccggttacatg
acgaaggaaatgcttgtaaagaagaaagagtttttaaagtggaaagataaacaaaagact
ttggaatcctggaaacaatacaagcctcagcattcaaataaaagtatcaaaagcgaaaag
agtttattgcctgctccaattttagcccagcagagcgatcctataccggagaaaattaaa
ctagaaccctggctgatagaagaaatggacaaaagtattttcgatgcatgggtaaatggt
agagaggataattttgcgcagcttttacattttatactatctgaaaacgtttctgtagat
tatcagcattcggagacttttataacaccgttgatggctgccgcagctagaggttgcata
aacacgactgagcaacttctaaatctaggtgcgaatctcaatttgagatctgctaacgat
tggaccgcgttagactgggcaaagagtaggaatcataccgaatgcgctgaattaatcgaa
gcttacatgaaaacttatgattgtgcggtaccgaataacgaactggcacatgtcacggag
acgtcactctccgaagaagataaattattacttgatatatatcatcatacgttcaatgat
gataatatcgattatgatctattattagaattggtcttttacatccatttaaaaatgcct
gccggctctattttgatatttttaccgggatatgacgacatagttacaatgaaagaaaag
ataaatgcggaagataagaaaatgaatcaaggtttacgctacaatttgttcgttcttcac
tcgaacatgcagacttgcgatcagaagaaagtgtttaaacctagtcctcagggcacgcga
aagattatcctttctacgaatatatcagagactagcattacgatcgacgatgtcgtgtac
gtcattgattctggaaaagttaaagaaaagtctttcgatgctatatcaagtgtttgtaca
ttgacttcaaactggatatctcaagcttgtgcaaagcaacggaaaggtcgagcaggtaga
tgtaggagaggaatctgctatcgtttgttctcttcgatccgatacaataatatgcaggct
tatcaaacacctgaaattctacgattaccgctgcaagaactctgtttatacacgaaacat
ttaacgtcgggaaatacacctatagctgaatttttggataaagctttggagccgccgtct
aacgtagtgaccaggaatgcagtacaattattaaagacaatcgatgcattagatccatgg
gaagatttaactgaattaggcagtcatttattagatttgccaattgaaccaagactcggg
aagatgttgttatatgccgttgtcctcaaatgtttggatcccattttaacaattgtttgt
agtttagcgtacaaagatccttttatattaccatcacaaccgtcgcaaaagagagcttta
accgcggcacgaaaaaaatttgccaccgcaacatactccgatcatatggtagtcctccga
gcgtttcaaggctggcagaacgctagagcaaccggcaaggaacgcgctttttgcgagaaa
aatttcatctccgctcccgtaatggagatggtagttggaatgcgtactcaacttctcggt
cagttgcgcgcgtctggctttgtcagagccagaagtcccggggacattcgagacttaaat
tcaaattcggaaaattgggctgtcgtgaaagcggctctgaccgcgggcttgtatcccaac
ttaattcgagttgatcgagagcacatgcagctacggacacagaaagaggtcaaagtattc
tttcatccctcgtcaacattaagagattatccaaagtcttcgaggatgacgtccgcgcaa
acacattgcaccaatgtgcaatccttaccgtgcgactggctgctttatgaggaaatgagt
cgtacaggacgtttctgtcatgtgaaaatcgttacagccgtaaatccattaactgtagcg
ttatttagtggaccagctagattaccaatggatgtaatctacgaagctgaagctgtaccg
gaaagcgaatcggattcagaggttgatgaatttcatgaaggaaccatttttaaacttgat
gattgggtggtgtttaaacttgatcctgaagcagctcaactgtttttacatttgcggcag
aagtggaacgccttgttcctcagacgtatgaaagcaccaaacaaggcaatgtcggcatta
gatgaaaaagttattaacactttggtaactgtaatcacgaatgaggaacaagcgtgtggc
ctccagcagcccgctggcatcggtcaacgtccgcgtccgttaatcgtcgattattaccct
gcaaatgttagaagagatgattattcggaaagatatttctag
DBGET
integrated database retrieval system
