Acromyrmex echinatior (Panamanian leafcutter ant): 105147769
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Entry
105147769 CDS
T03917
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105147769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105147769
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105147769
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105147769
NCBI-ProteinID:
XP_011057318
LinkDB
All DBs
Position
Unknown
AA seq
282 aa
AA seq
DB search
MDLQYKTIHPVKYLQDHLEQNVRTDGRKFLSFRPVSVNVSSIVQADSSAIFKLGDTTAVC
GIKAELAAPKADTPDHGYIVPNVELSPLCSSKFRPGPPSEQAQVLSKFIDIILSNSAALD
LKDLCICKSKLVWVLYCDILCLNYNGSVIDACTGALMAALKTLTLPEVNYTKETALTIVN
PKNRKKFIVRTLPISTSFAVFEKRLLVADPTDDEEDLSSGKFSIVMDDEEKICYVHKPGG
IPISQNLLSKGLEMAKTRAKLVRSVINAAISTLNVKNEEINT
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggatttacagtacaaaacgatccatcctgtgaaatatttgcaggatcatctggaacaa
aatgttcggacagatggtaggaaatttttgtcatttcgcccagtaagtgtaaatgtttca
tcaattgttcaggcagacagttcagcgatatttaaattaggtgacacaactgcagtttgt
ggtattaaagctgaattagcggcaccgaaagcagacactccggatcatggttacatagta
ccaaatgtggaattatctcctctctgttcttctaagtttcgtccaggcccaccgagcgaa
caggcgcaggtgctctctaagttcatagatattattttgagtaactcagcggcacttgac
ttaaaagatctttgcatctgtaaaagtaaattagtatgggtattatattgtgatatcctg
tgtctgaattacaatggctcagttatagatgcttgtactggagcattgatggcagctctt
aaaacgttgaccttacctgaggtgaattacactaaagagacagcactaactatcgtaaat
ccgaaaaatagaaagaagtttattgtaagaacattaccaatttctacatcgttcgcagta
tttgaaaaacgattattagtagctgatccaacggatgatgaggaagatttgtcatcagga
aaattttctattgtgatggatgatgaggaaaaaatttgttatgtacataaacctggtgga
attccaatctctcagaatttactttccaaaggattggaaatggcgaaaacaagagcaaag
ttagttcgatcggtaatcaacgccgctatttcaacactgaatgtaaaaaatgaggaaata
aatacttga
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