Acromyrmex echinatior (Panamanian leafcutter ant): 105148000
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Entry
105148000 CDS
T03917
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03008
Ribosome biogenesis in eukaryotes
aec03013
Nucleocytoplasmic transport
aec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105148000
03015 mRNA surveillance pathway
105148000
03008 Ribosome biogenesis in eukaryotes
105148000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105148000
03009 Ribosome biogenesis [BR:
aec03009
]
105148000
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105148000
mRNA cycle factors
Stress granule specific factors
105148000
Ribosome biogenesis [BR:
aec03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105148000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
105148000
NCBI-ProteinID:
XP_011057720
UniProt:
F4WQR3
LinkDB
All DBs
Position
Unknown
AA seq
643 aa
AA seq
DB search
MPKEMNKPWDGRNRGHEDKAYFDHNDRIERPVGRDGRFHVGPIKHHVSFRIHRPSNLISR
NLDNDIPMTSNDNTRQMIINQRDRERGGRIRRTVYRGGNNSVPNFKGVQFQGIQGRNFKG
DQSNSRMQSLPLRESNGYRINIPYGHKYEKDYIINTLLNYIAPKVFIPIMYKKTRTDACF
YIDDHKTANALLNCDRKITMSDGFKLRVRVKPEFPNCDIDDEVKERLKQAMAKRYRQDTK
ALNLSKFHLDSDLCSDYFYALSYPIMMMTVLDIMAEHIPNLEALNLEGNKLQNIERLGIL
TKKFLKLKILHMGDNKIRDIYQLDAIKDLQLNELKLSGNPVCNKYKSRQNDYIRDVRRRF
PRLLFLDGTELPRPIVFDIVDANIPLSQKMFVAVDAKVQEIAKQFLLLYFTVFDSENRQP
LLDAYDEHACFSMTISISHNNKLNGYHLENRNLFRINDTTRRQKFLKQGRLPVVSFISEM
PRTRHLLSTFTMDISLATQTMMFITITGYVQLDNKEEPIIYYFNRTFIIVPKDEGYCIQN
EQLHISQLSESQLTKLHQQLNQLENQQVQSEAPALSSVEVTNFVATEPSDEMKQQMTLTL
SQQTNMNLEWSLKCLQDTQWNYDNAVSAFILNREQIPSQAFTK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggagatgaacaagccgtgggacggtcgcaaccgaggacacgaggacaaggct
tacttcgatcataatgatcgaatagaaagacctgtaggaagagatggaagatttcatgtt
ggtcccatcaagcatcatgtatcgttcaggattcatagacctagcaatttaatatcccgt
aatttggacaacgacattccaatgacgtctaatgataatacaagacaaatgataatcaac
cagagagatagagaaagaggcggtaggattcggcgtactgtttatcgtgggggaaacaat
tctgtgcccaatttcaaaggagttcaatttcaagggattcaaggaaggaattttaaggga
gatcaatcaaattctaggatgcaatctcttcctttgagagaatctaatggatatagaatt
aatataccatatggccataagtatgaaaaggattatattataaatacccttttgaattat
atagcacctaaagtattcattcctataatgtacaaaaaaacaagaactgacgcttgtttt
tacatagacgatcataagacagcaaatgcgttactaaactgtgatcgaaagattacgatg
agtgatggatttaaactgcgagtgagggtgaaaccagaatttccaaactgcgatattgat
gacgaagtaaaggaacgattgaagcaagcaatggctaagagatatagacaagatactaag
gctttgaatttatccaaatttcatcttgattctgatctttgctctgattatttttatgcg
ctgtcctatcctattatgatgatgactgtattggatattatggcggagcacataccgaat
ttagaagccttgaatttagaaggaaataaactgcaaaatattgagagactcggcatacta
actaagaaattcttaaaattgaagattcttcatatgggtgataataagattagagatatt
tatcaactagatgctattaaggacttacaattgaacgaattgaagttatctggaaatcct
gtttgtaacaagtataaatctcgacaaaatgattacattagagatgttcgaagacgattt
ccaagattactgtttctggatggcacagaattaccacgaccgattgtcttcgatatagta
gatgccaacattcctctatcgcagaagatgtttgtcgctgtcgatgcaaaagtacaagaa
attgctaaacaatttttactattatattttacagtattcgatagtgaaaatcgtcaacct
cttctggatgcatatgacgaacatgcatgcttcagcatgacgataagcatttctcataat
aacaaattaaatgggtatcatttggagaatcgaaacctattcagaatcaacgatacgacc
agaagacagaaatttttgaaacaaggtagattacctgtagtttcttttatatcagaaatg
ccacgaacaaggcatctgttgagtacttttaccatggatatttctcttgctacacaaaca
atgatgttcattacgataacaggctacgttcaacttgataacaaggaagaacctattatc
tattatttcaaccgaacatttataattgttccgaaggatgaaggatattgtattcagaat
gagcagttgcatattagtcagctatctgagtcacaattaacgaaattgcaccaacaacta
aatcagttagaaaatcaacaagtccagtcggaagcgccggccctgagttcagtagaagta
acgaatttcgtggcaacggaacccagtgatgaaatgaagcagcagatgacgttaacgtta
agtcaacaaacaaatatgaatctggaatggagcttgaaatgcttacaagatacgcagtgg
aactacgataatgcagtctctgcctttattttaaatcgcgaacagataccatcacaagcg
tttacgaagtaa
DBGET
integrated database retrieval system
