Acromyrmex echinatior (Panamanian leafcutter ant): 105148041
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Entry
105148041 CDS
T03917
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105148041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aec03021
]
105148041
03036 Chromosome and associated proteins [BR:
aec03036
]
105148041
Transcription machinery [BR:
aec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105148041
Coactivators
SAGA/TFTC/STAGA complex
105148041
Chromosome and associated proteins [BR:
aec03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105148041
STAGA complex
105148041
TFTC complex
105148041
SAGA complex
105148041
SLIK complex
105148041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_RIG_1st
WDR54
VPS8_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
105148041
NCBI-ProteinID:
XP_011057802
UniProt:
F4WQV2
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
METDKNTMLAVLQLLKKYNFKGTEELFRKEANLTDISIDDSQQSDSDVTSVLSAYKSEGD
PAQYEKAYSELKKFVEGALDIYKHELGTILYPVLVHMYLELVYNNHSQEAKQLMEKFSGN
LQEYYQDDLKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKQQIEATSGAMVGEATRQDNKVKVYYGLLKEPDIQCMEPNKE
EEDDKEGGTDGDKPKKKKAKKDPLFSKKTKSDPNAPAVGRMPLPNLKDADKLEKIKSLRE
ASKRVVLGPDTLPSICFYTMLNTVYTVTAAEIAEDSSLLATGFSNSTIKVWSLIPQKLRL
MKTGESLQDINREAEDVLVRMMDERTSETTKNLYGHSGPIYSLSFSPDRNLLLSSSEDTT
IRLWSLHTWTCVVCYKGHLFPVWCVRFSPHGYYFSSASNDKTARLWATDSHQPLRVFSGH
YSDVDVIQFHPNSNYIASGSSDMTVRLWDCVTGNQVRLMTGHKGPIFSLAFSTEGRFLAS
AGADHRVLVWDLAHGHLVAALSGHTGNIHCLSFSRDGNILVSGSLDCTLKLWDFIKLAEE
MSLEDVNVSHNPDVKTNSESYLLRTFPTKSTSVLTLHFSRRNLLLGIGMFEST
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgataaaaataccatgctcgcagttttgcagcttttgaagaagtacaatttt
aagggaactgaagaattatttagaaaagaagctaatcttactgatatttcgattgatgac
tctcaacaatctgattctgatgtgaccagtgtcctttctgcttataaaagcgaaggtgat
cctgcacaatatgagaaagcatacagcgaattgaaaaagtttgtggaaggagctttggat
atttataagcatgaattgggaaccatattatatccagttttggtgcacatgtatttggaa
ttggtttataataatcattctcaagaagcaaaacaactcatggaaaagttcagtggaaat
ttacaagaatattatcaggatgacttgaaaagattatccaatgtaacaaaacgggaacaa
atggcagggaatgaattaaccgacacttttaaatctaatcagtttataattagaatgtcg
agggataccctttcgatactaaaacgacatttgcaagaaaagaaacatagtgttttatta
aatattatacaggagcatctttattttgatatgtatgaaggtgttgctcgtaataaacaa
cagatagaagcaacatctggagctatggtaggagaggctactaggcaagataacaaggtc
aaagtctattacggacttttaaaggaacctgatattcaatgtatggagccaaataaagaa
gaggaagatgataaagaaggtggtacagatggtgataaaccaaaaaagaaaaaagctaaa
aaagatcccttattttcaaagaagacgaaatctgatccgaatgcaccagctgtaggcaga
atgccgttacccaatctgaaagatgcagataaactggaaaaaattaagtccttgagggaa
gcgtcaaagagagtcgtccttggacctgatacattaccatctatatgtttttatactatg
ttaaacactgtttacactgtaacagcggcagaaatagcagaggactcaagtttattagct
accggatttagtaattctaccataaaagtgtggagtttaattccacaaaaattgaggttg
atgaaaacgggtgaatcattacaagatattaatagagaagcagaagacgtattagttaga
atgatggacgaacgaacatctgaaactacgaaaaacctgtatggtcacagtgggccaatt
tacagtctttcatttagtccagacagaaatcttctgctttcgtcttcagaagataccaca
ataaggctatggtcactgcacacatggacatgtgtcgtttgttacaaaggccatttattt
cccgtgtggtgcgtacgattctcaccgcacggttattacttttcgagtgcctcgaatgac
aaaactgccagattatgggcgactgactctcatcaaccattacgagtattttctggccat
tattcagatgttgatgtaattcagtttcatccaaattcgaattatatcgcgagtggttca
agcgatatgaccgtgagattatgggattgtgtaactggcaatcaagtccgattgatgact
ggacataaaggaccaattttttctttagctttctcaacagaaggtcgctttttagcttca
gctggggcagatcatcgtgtacttgtttgggatttggcacacggtcaccttgttgcagcc
ttatctggtcatacagggaatattcattgtttatcgtttagtcgggatggcaatatttta
gtctcaggttccttggactgcacactgaaattatgggatttcataaaattagcagaagaa
atgagtttggaagatgtcaacgtttcgcacaatccagatgtaaaaacaaactcggaatct
tatctactacgtaccttcccgacaaaaagcacatctgtcctaacgctacatttttcacgt
agaaatttattactgggtattggcatgtttgaatcgacataa
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integrated database retrieval system
