Acromyrmex echinatior (Panamanian leafcutter ant): 105148116
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Entry
105148116 CDS
T03917
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105148116
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
105148116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
UBA_N4BP1_C
zf_CCCH_4
zf-CCCH_2
RuvA_C
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
105148116
NCBI-ProteinID:
XP_011057921
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MTVAGKRYVDCTVLDTGSMPDAEDSSYDSDYEAEDSTTTTATTTTTTMTTTAATRCPRSE
SQISPAHSDVSRTTSDTLAAEFAEYVTIQGPPPTQNPGYTARVEFALKLGYTEKLVQAAL
QKLGPDPGQNELLAELIKLGATCSSKFTDGPEEVDDLPDAEADIDDGGGSILTSITATNA
TVNAISSMDLLLRPVVIDGSNVAMSHGNKEVFSCRGIKICVDWFRARGHKEITVFVPKWR
KEASRPDNPVADQEILSELEKDRLLVFTPSRLVGGKRMVCYDDRYILKLAAEIDGIVVSN
DNYRDLAQENPEFRRVVEEKILMYSFVNDRFMPPDDPLGRSGPTLENFLRIVPKKTDPAP
PCPYAKKCTYGNKCKFRHPERGPHPHKSVTERLVEHAQRHLQARGPSLSLPLSSTNASPQ
HPPLCKTKSAMPSNVVQFLSSVPKSRSVENVTSDLSTTSPVMYSQQMPPTQNSQGYPSSA
NWPTSRVSNSEPEPVKLHRKLQRQLTLNPACDPRLYQLRRYHQQQQTGQSLQQQQSVINS
SRSSMQHRPLTRLASNDSSYPGAASMSWDYPDCLQSHHQHVMRIASAPDSYRAWPPRGTA
LMPPSRVQRIGTSDPQLNLLPSPPSTSLHVPWGMQTQDIRRRLHYHLANIFPEEQVQAVM
TLHPHETDPQQICAAILTMFPKNQN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgctggaaagagatacgtagactgcacagtattggatacgggcagcatgcca
gacgccgaggactcttcatacgacagcgactacgaggctgaggattcgacaacaacaacg
gcgacgacgacgacaacaacaatgacaacgacagcagcgacgcggtgtccacgatcggag
tcgcagatatccccagcacactcggatgtgtctcgcaccacatcggacaccctggcggca
gagttcgcggagtacgttaccatccagggaccaccacctacgcaaaacccaggttacacc
gctcgcgtggagtttgcacttaagttgggctacaccgaaaaattggtgcaagcggcgcta
cagaaattgggcccggatccgggtcagaacgagctgttggccgagttaatcaaactcgga
gccacttgctcctcaaagtttaccgacggtcccgaggaagtagatgatctaccggatgcc
gaggcagacatcgatgatggcggaggatcgattttgacctcaataacggcgacgaatgcc
acagtgaacgcgatctcatcaatggacttgttgttgaggcctgttgtcatcgacggcagt
aatgtcgctatgagtcatggcaataaggaagtattctcttgtcgcggtatcaagatttgt
gttgattggttccgcgccagaggacataaggagatcactgtctttgtacccaagtggcgg
aaagaagcctcgagacctgacaatccggtcgctgaccaagagatcctgagcgagctcgag
aaggatcgtctgcttgtgtttacgccttccaggttggtgggtggaaagcgtatggtgtgt
tacgacgatcggtacatcctgaaactggccgcggagatcgatggcattgtcgtcagcaac
gacaactacagagatttggcccaagagaatcccgagtttagaagggtcgtagaggagaaa
attctgatgtacagctttgtaaacgatcgattcatgccaccagacgatccactcggcagg
agcggacctacattggaaaattttcttagaatcgttcctaaaaaaaccgatcccgctcct
ccatgcccttatgccaagaaatgtacatacggcaataagtgcaagttccgacatcccgaa
agaggaccacatccacataaatctgtgacagaacgattggtggagcatgctcagcgtcac
ttacaggcccgtgggcccagcctgagcctgccattgtcatccacaaacgcatctccacaa
catccgccgctctgcaaaactaaatcagccatgccatcgaatgtcgttcaattcttgtcg
tctgttccgaagagtagatcagtggaaaatgtcacatctgatttgtctacaactagtccc
gttatgtacagccaacagatgcctcctacacaaaattctcaaggttacccttcctcagcg
aactggcccacatcaagagtgagtaattccgaaccagaaccggtgaaactgcatcgcaag
ctacagcggcaactaactctgaatccagcgtgtgatccgcgactttatcaactcagacga
tatcatcaacagcagcaaaccggacagtcattgcaacaacagcaatcagttatcaactca
tcacgctctagtatgcaacaccgaccgttgacgagactcgccagtaatgactcgtcgtat
ccgggtgctgccagtatgagctgggattatcctgactgccttcagtctcatcatcagcac
gtgatgcgtatcgcttctgccccggattcttacagagcgtggcctcctcgtggtaccgcc
ttgatgccgccatcacgagtgcagaggataggtacctcggatccccaattaaacctatta
ccatccccgccatctacaagtttacacgtgccctgggggatgcagacccaggatattcga
cgtcgcctgcactatcatctcgccaacatttttcccgaggaacaagtgcaggctgtcatg
acgcttcatccccacgagaccgatcctcagcagatttgtgctgccattttgacgatgttt
cccaagaatcagaattga
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