Acromyrmex echinatior (Panamanian leafcutter ant): 105148291
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Entry
105148291 CDS
T03917
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105148291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aec03009
]
105148291
Ribosome biogenesis [BR:
aec03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105148291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_TEP1_2nd
Utp13
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_WDR75_2nd
VPS8_N
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
105148291
NCBI-ProteinID:
XP_011058243
UniProt:
F4W5X0
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MSKANLKEAFEVESKYEAFYTGGNIQWCANAEYLFCQKGGTVSILSMSKGSVISSLCITE
ADQLEDTINCFALCNEDTGIITHHKSGLFKLWDWKTNKLMKLWKSIHKGPVMQITLSNNS
ILMASGGSDGSVRLWNLQHHACTHNFKGIQGVVSVLEFYSNNEKSLLFGAGDNTKIYGWD
ITTGQEKVILSGHFSKVTSLSFHENGNYLVSSGRDRVLILWDISTGTSIRVLPVYEGIEG
TFMISAKCLPVFIKSRKSGGIYVASAGEKGVVKIWEMKTGKQIYVQDDSLVPPSKEEGGL
SITHLLYNSISNIFAVVSVDHNIIVHSMELFECKKQLVGYSDEILDVAYLGDNDSHIALA
TNSCDIKLYEIASMNCQLLCGHTDSILALATTLANVNLLLSSAKDNSVRVWLLDKDTMRM
SCIGHAIRHTASISSIAISQTLPKFFTTVAQDSCLKLWELPNNLESHNQDLSLNVRHTTL
AHQKDINCVTISPNDKLIATASQDKTAKLWYAENLQLLGVLHGHRRSVWCVRFSPIDQVL
LTTSADCTMKLWSLTELNCLKTFEGHESSVLRGEFLSRGMQLITSGGDGLLKLWNIKTSE
CISTLNQHESHVWTLAVTKDQKHIISGGSDSLLVIWRDVTEERKAQAASEKAQFVLEEQR
LANLLKAEELQAALKLALKLERPLQVLKIIEAISKKTNNEFTEIIKELKPNHKETLLKCA
VTWNMNSRNSLAAQVIINALITEIGTQELQTPNLSSTLEVLMPYTDRHFKRLTKLLQDLY
LLTYTFNRMKPDIISIGTK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagctaatcttaaggaagcattcgaagtggagtccaagtatgaagcattttat
actggcggcaatatacaatggtgtgcaaatgcagaatacttattttgccaaaaaggaggc
actgtgtccatattgtctatgagcaaaggttctgtgatatcatcattgtgtataacagaa
gctgatcaactagaggatacaatcaattgttttgcactttgtaatgaagatacaggcata
atcactcatcacaagagtggactgttcaaattatgggattggaaaactaataagttaatg
aaattatggaaatcaattcataaaggacctgtaatgcaaataactctttcgaataatagt
attttaatggcatctggtggaagtgatggatctgtcagattgtggaatttacaacatcat
gcatgtacacataattttaaaggaatacagggagtagttagtgtgttggaattttattcc
aacaatgaaaaatcacttctctttggagctggtgacaacacaaaaatttatggttgggat
atcactactggacaggaaaaagttattctctctggacattttagtaaagtaacatctctt
agttttcacgaaaatggaaattatttagttagttcaggaagagacagagtactgattttg
tgggatatatccactgggacatcaatacgtgttttaccagtatatgaaggaattgaggga
acttttatgatatccgcgaaatgtcttccagtatttattaagtcacgtaaaagcggtggc
atatatgttgcttcagctggcgaaaaaggtgtcgttaaaatctgggagatgaaaacgggc
aagcagatttatgtgcaagacgattctttagtgccaccgtctaaggaagaaggaggttta
tcaattacgcacttactttacaacagcatctctaatatttttgcagtagtatctgtcgat
cacaacataattgttcattcaatggaattattcgaatgcaaaaagcagttggtaggctac
agcgatgaaattctagatgttgcgtatcttggagataatgatagtcatattgcactcgcg
actaatagttgtgatataaaactttatgaaattgcttctatgaattgtcaactattatgc
ggtcatactgacagcattttggctctcgctacgactttggcaaatgtaaatctgctccta
tcttcagccaaggataatagtgtccgcgtatggctactggataaagacacaatgaggatg
tcttgcattggacatgccattagacatacagcatcgattagttctattgccatatctcaa
acattacctaaattcttcactactgtcgctcaagattcatgcctgaaactgtgggaatta
ccgaacaatctcgaatcacataatcaagatttatcattaaatgtaagacatacaacatta
gcgcatcaaaaagatataaactgtgtaaccatctcaccaaatgacaaattgattgctaca
gcgtcgcaagataaaactgctaagttatggtatgctgaaaatttacaattactcggtgtg
cttcatggtcaccgaagaagcgtatggtgtgttcgattttcgccaattgatcaagtactt
ttaacaacgtctgctgactgtactatgaaattgtggtctttaacggagctcaattgttta
aagacgtttgaaggacatgaatcttctgtcttaagaggagaatttttatcacgcggtatg
caactaattacgtcgggtggagatggtcttctgaaattgtggaatatcaaaacgtccgaa
tgcatatcaactttgaaccaacacgaaagtcacgtttggacgctcgcagttacaaaagat
cagaaacatattatcagtggaggtagcgattcattactagttatttggagagatgtaact
gaagaaaggaaagcgcaagccgcatcggagaaagcacaatttgtgcttgaagagcaaagg
ttggccaatttactcaaagctgaagaactgcaggctgcgttaaaattggctctaaaacta
gagcgaccattacaagtgctcaagattatagaagctatatcgaagaagacgaataacgag
tttacagaaataataaaggaattaaaaccaaatcataaggaaacgttactcaagtgtgca
gttacatggaacatgaacagccgaaactcgcttgctgctcaagtaattataaatgcctta
ataacagagatcgggacgcaggagttgcagacaccaaatttatcttctactctagaagtt
ttgatgccttataccgacagacattttaaaagattgacaaaacttttgcaggatttatac
ttattaacatatacttttaatcgtatgaaacctgatattatatcaattggcactaaataa
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