Acromyrmex echinatior (Panamanian leafcutter ant): 105148485
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Entry
105148485 CDS
T03917
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105148485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aec03009
]
105148485
Ribosome biogenesis [BR:
aec03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105148485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD_LRWD1
Beta-prop_DCAF12
Svf1_C
WDR54
Motif
Other DBs
NCBI-GeneID:
105148485
NCBI-ProteinID:
XP_011058556
UniProt:
F4WRW1
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MTSFKKINTKVFARTGPELTEDNIYWKKYAPPVLIKEFGPIDYIDFSPVEPHYFATTCSV
RVQLYNPITKLATKTYSKFKEAAYGGCFRRDGKLLCVGGEEAVIKLFNISSNSVLRIFSG
HKAAVHRVFFTTDDVHIASFSDDKTVALWDIPSEKQLTSFNEHTDYVRAGAVSPVSSDVL
LSGGYDKIVNMYDARTNKKVFSVNHNAPVESLLFLPTGGIFLSAGGTDIKVWDALAGGKL
LAKITQHHKTITCLKIASNGHRILSGSLDRHVKIYDAGTYKTLHALDYPNAVLSIGISVD
DETVVAGMVDGMISVRRREEDVKDVIKPKRKKVSYRHAGENLHVRSIDVVVHQEVKEIMS
KHDACLRKFQYSKALDCVMMNYVVNKTPHVTVALTQELIRREGLRRALAGRDGKSLVNII
KFLNKYIGSIRFGRVLSHVANVLLDVYEDHLDELSEETRKTFAILSQKLQEEEQLILALT
QLQGSMQMILSGAETSSLPAIKEIQSLEPSNAAQTERDIILNIA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgtttaagaagataaataccaaagtgtttgcccgaacaggaccggaattaact
gaagacaatatatattggaaaaaatatgcgcctccagttttaataaaagaatttggtccg
atagactacattgacttctcgccagtagagccacattatttcgcaacaacctgctcagta
cgagtacaactgtataatcctatcacaaagttagctacaaaaacttacagcaagttcaaa
gaagctgcatatggaggttgctttcgtagagatggcaagctgttgtgtgtgggtggagaa
gaagcagtgattaaactctttaatatcagttcaaatagcgtgttgcgaatcttttctgga
cacaaagctgcagtgcacagagttttcttcacaacagatgatgttcacattgcctcattt
tcagacgataagactgtagctttgtgggacatacctagtgaaaaacaattgacaagcttc
aatgaacatacagattatgtcagagccggcgcagtgagtcctgtatcctctgatgtgtta
ctatccggcggatatgacaaaattgtgaatatgtatgatgctagaacgaataagaaagta
tttagtgttaatcataacgcaccagtagaaagtttactcttcttgccgactggaggaata
tttctgtcagcaggtgggacagatattaaagtatgggatgctctcgcgggtggcaaattg
ctcgcgaaaattacacaacatcataaaactattacttgtctgaaaattgcttctaatggt
catagaatactgtctggttcgttggacaggcatgttaagatttacgatgctggaacatat
aaaactcttcatgctttggattatcctaatgcggttctcagcataggaattagtgtagac
gatgaaaccgtcgtagctggtatggtagatggtatgatttctgttagaagacgcgaggaa
gacgtgaaagatgtaataaaaccgaaacggaagaaggtgtcatataggcatgcaggagaa
aatctgcatgtgcgaagtattgacgtagtcgtgcaccaagaagtgaaagagataatgagc
aagcatgatgcctgtttgcgaaagtttcaatatagtaaagcgctcgattgtgttatgatg
aattatgtggttaataaaacgccacatgtcactgtagcgcttacacaggaacttattagg
cgcgaaggtttaaggcgagcattggccggtagagacggcaagtcactagttaacattatt
aaattcttgaacaagtatattggcagtatacgttttggaagagtattatcgcacgtagca
aacgtgttgttagacgtttacgaagatcatttggacgaattgtcggaggaaacacgaaaa
acgtttgctatactgtcgcaaaaattgcaagaggaagaacagttaattttagctttaacc
caattgcaaggttcaatgcaaatgatattgtctggtgctgaaacgtcttctttacctgct
ataaaagaaattcaaagcttggaaccatcaaacgccgctcaaacagaacgtgatattatt
ttgaatatagcttaa
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