Acromyrmex echinatior (Panamanian leafcutter ant): 105148869
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Entry
105148869 CDS
T03917
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aec03041
]
105148869
03016 Transfer RNA biogenesis [BR:
aec03016
]
105148869
Enzymes [BR:
aec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105148869
Spliceosome [BR:
aec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105148869
Transfer RNA biogenesis [BR:
aec03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
105148869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105148869
NCBI-ProteinID:
XP_011059179
UniProt:
F4WT60
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MTAFEEMGVLPEIGKAVDEIEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDLESGKGATGAVVQQPTHWGLSLFDRGRAMAVTTDGLRCQSREQKEWHGCR
ANKGVLGSGKYFFEATVTDEGLCRIGWSTSQAALDLGTDKFGYGFGGTGKKSNAKQFDNY
GEAFGMHDVIGCFLDLMKGEIKFTKNGMDLGVAFILNAQQKSQTYYPAVVLKNAEMAFNF
GAQPFKHPPSNDYVAVSSAPKEFIKFNPVNSNQSSSNESGKLKNNAPQAIIIEPSRELAE
QTYNQIQKFKTHLKDPTIRELLVIGGISVKEQIAVLNSGVDIVVGTPGRLEDLIQGGYLL
LTHCRFFVLDEADGLLKQGYTELIDRLHKQIPKITSDGKRLQMIVCSATLHAFEVKKMAE
RLMHFPTWVDLKGEDAVPETVHHIVVMVDPQKDKSWHNCRNYIETDGVHARDEMNRTNDI
ACTLSEGVKILKGEYCIRAIKEHKMDRALIFCRTKLDCDNLERYLKKSGGQQFSCVCLHG
DRKPGERKANLEKFKRKEVKFLICTDVAARGLDITGLPFMINVTLPDEKSNYVHRIGRVG
RAERMGLAISLVSSVPEKVWYHGEWCPSRGRNCSNTNLTDQGGCCTWYNEPQYLADIEDH
LNVTIQQVGPDIKVPMNEFDGKVTYGEKRMTMGSDYKDHVQQMAPVVAELAALESKAQLA
FLNMHMAER
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgactgctttcgaagaaatgggcgttttgccagaaataggcaaagcagttgatgaaata
gaatggacactaccaacagatgttcaagctgaagctatcccattgattttgggtggaggc
gatgtactcatggccgcagaaactggtagtggaaaaactggtgctttctgtttgcctatt
ttacaaatagtttgggagacccttaaagatttggaatctgggaaaggagctactggagct
gtagttcaacaaccgacgcattggggtctgagtctatttgatagaggacgagctatggca
gtaacgacggatggtttaagatgtcagagtagagaacaaaaggaatggcatggttgccgt
gcaaataaaggagtattgggaagtggcaagtatttttttgaagcaacagtcactgatgaa
ggtttatgtcgaataggctggtctacatctcaggctgccttagatttaggaacagacaaa
tttggttatggatttggtggtacaggaaagaaatcaaatgcgaaacaatttgataattat
ggagaggcctttggaatgcacgatgtgattggatgttttctagatttgatgaaaggtgaa
ataaaatttaccaagaatggcatggatttgggtgtcgcgtttatattaaatgcacagcaa
aaatcgcagacttactatccagctgttgtattgaaaaacgctgagatggccttcaatttt
ggagcacaaccgtttaagcatccgccttcaaatgactatgtggctgtgtcttcggctcca
aaagaatttatcaagttcaatcctgttaatagcaatcagagttcgtctaatgaaagtggt
aaactaaaaaataatgcgcctcaagcgatcatcatagagccttctcgcgaattagctgaa
caaacttacaatcaaattcaaaagtttaagacacacttaaaggatccgacgatcagagag
ttacttgtcatcggtggaataagtgtaaaagagcagattgctgttttgaattctggcgtg
gatatagtagtcgggactcctggacgattagaagatctcatacaaggcggttatttgttg
ttgacacattgcagattctttgtactggacgaagctgatggactactaaaacagggttac
accgaacttatcgatcgtctgcacaaacaaattccgaaaattacgtcggatggcaaaaga
ttgcaaatgattgtgtgttcggcgacattacacgcatttgaagtgaaaaagatggccgaa
cgtttgatgcattttccaacttgggtggatctaaagggcgaagatgcggtgcctgagacc
gtacatcatatcgtagtgatggtagatccgcagaaagacaaatcatggcataactgcagg
aattacatagaaactgatggcgtgcacgcaagagatgagatgaatcgaacaaatgatatt
gcctgtacgttatcagaaggtgtaaagatactgaagggagagtactgcattcgtgctatc
aaagaacataaaatggaccgagcattgatattctgtagaacaaaactcgattgcgataat
cttgaaagatacctgaaaaaatccggtggacaacagttttcgtgcgtgtgtttacacgga
gacagaaagcccggagagcgtaaggctaatttggagaagttcaaacgcaaggaagtaaaa
tttttgatttgcaccgatgtggctgctagaggattggatatcactggtttacctttcatg
ataaatgtgacgctgcctgacgagaagtctaattatgtgcatcgcattggaagagttggt
agagctgagagaatgggtctagctatttctttagtcagtagcgttccagaaaaggtatgg
tatcatggcgaatggtgtccttctcgcggaagaaactgcagcaacaccaatctgaccgat
caaggtggctgttgtacatggtacaatgaacctcaatacttggcagatattgaggatcac
ttgaatgtaacgattcaacaagtcggtccagacataaaagtgccaatgaacgagtttgat
gggaaagtcacgtatggcgaaaagagaatgacgatgggttctgattacaaagaccatgtc
cagcaaatggcccctgttgtggccgaattggccgcgctggaatccaaagcgcaacttgcg
tttttaaatatgcatatggcggagcgttaa
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