Acromyrmex echinatior (Panamanian leafcutter ant): 105149087
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Entry
105149087 CDS
T03917
Name
(RefSeq) probable histone-binding protein Caf1 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03082
ATP-dependent chromatin remodeling
aec03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105149087
03083 Polycomb repressive complex
105149087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aec03036
]
105149087
Chromosome and associated proteins [BR:
aec03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
105149087
Histone modification proteins
HAT complexes
HATB complex
105149087
HDAC complexes
Sin3A-HDAC complex
105149087
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
105149087
PRC2.2
105149087
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
105149087
Heterochromatin formation proteins
Other heterochromatin formation proteins
105149087
Chromatin remodeling factors
NuRD complex
105149087
NuRF complex
105149087
NuRF complex (fruit fly)
105149087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
105149087
NCBI-ProteinID:
XP_011059554
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MLTMLSMIQEAELEKNIKKSDKPNKKNTPTKIIRINSIQPNVPNTIKRIKYNGLESSQGD
LSAAVCSEGFDDAVEERIINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEG
KDYSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE
IKINHEGEVNRARFMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQK
EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETPG
SEIETGS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttgactatgttgagtatgattcaagaagctgaattggagaaaaacatcaaaaaaagt
gacaaaccgaataagaaaaatacaccaactaagattataaggattaattctatacaacca
aatgtaccaaatactatcaaaagaattaaatacaatggacttgaatcttcacaaggagat
ttaagcgccgctgtttgttcagaggggtttgacgacgctgtggaggaacgtattatcaat
gaggaatataaaatatggaagaagaatacaccatttttatacgatcttgtgatgacacat
gctttggaatggccttctttaacggctcaatggctgcctgatgtcaccagacctgaagga
aaagattattcaatccacaggttaattttaggcactcatacttcagacgaacaaaatcat
ttgctgatcgccagcgtccagctgccgaatgaagatgctcagtttgatgcttctcattac
gataatgaaaagggtgaatttggtgggtttggttctgtgagtggcaaaatcgagatcgag
attaagattaatcatgaaggtgaagttaatagagcgcgattcatgccgcaaaatccgtgt
gtaatcgcaacaaaaactccttcgagcgacgtgcttgtattcgattatactaaacatccc
agtaaaccagatcccaatggagaatgtcatccagatttgagattgcgaggacatcaaaag
gaaggctacggactttcatggaatccgaatctcaatggatatttacttagtgcatctgac
gatcacacgatttgtttgtgggacatcaatgccacaccgaaggaaaatcgtgttatcgat
gcgaaaactatctttacagggcacacagccgtggttgaagatgttgcttggcatctgcta
catgaatcattatttggttcggtcgctgacgatcaaaagctcatgatctgggacactaga
tgcaacaatactagtaaaccaagtcatactgttgatgctcataccgctgaggtaaactgc
ttaagtttcaatccgtattctgaatttatattggctactggcagtgctgacaagactgtg
gcactttgggatttgcgaaatcttaaattgaagttacattcatttgaatcacacaaggac
gagatcttccaagtccaatggtcaccacataatgaaactatattagcaagcagtggcaca
gatagacgattacatgtttgggatctcagcaaaatcggcgaggagcagtccagcgaagat
gctgaagatggacccccagaacttctgtttatacatggaggtcatactgcgaaaataagc
gacttttcatggaatccgaatgaaccatgggtcatatgctcagtatcggaagataacata
atgcaagtgtggcaaatggcggagaatatttacaacgacgaggaacccgagacacctgga
agtgagattgaaactggctcataa
DBGET
integrated database retrieval system
