Acromyrmex echinatior (Panamanian leafcutter ant): 105149222
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Entry
105149222 CDS
T03917
Name
(RefSeq) LOW QUALITY PROTEIN: superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105149222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105149222
03041 Spliceosome [BR:
aec03041
]
105149222
03009 Ribosome biogenesis [BR:
aec03009
]
105149222
03016 Transfer RNA biogenesis [BR:
aec03016
]
105149222
Enzymes [BR:
aec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105149222
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
105149222
Spliceosome [BR:
aec03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105149222
Complex C
U4/U6.U5 tri-SnRNP related factors
105149222
Ribosome biogenesis [BR:
aec03009
]
Eukaryotic type
Pre-60S particles
Helicases
105149222
Transfer RNA biogenesis [BR:
aec03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
105149222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
ResIII
DEXQc_Suv3
Helicase_C
NPHP3_N
nSTAND3
ATPase_2
Death_3
Motif
Other DBs
NCBI-GeneID:
105149222
NCBI-ProteinID:
XP_011059797
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MANFSEDLFDVFDEHGDEVEILDIPKKIKPEVGIKRHSDADDDKATIKKLRHDSVLNDIN
LEEVACRITVHTIETVESCMHEIAIPPDQEYVPLEHQQGKPAKEYKFILDPFQKEAILCI
ENNQSVLVSAHTSAGKTVVAEYAIACSLKDKQRVIYTTPIKALSNQKYREFYEEFKDVGL
VTGDVTINPTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLI
LLPDNVHYVFLSATIPNARQFAEWVAHLHHQPCHVVSTDYRPTPLQHYIFPVGGDGIHLV
VDEMGQFKEENFNRAMACLQNMGDAAKGDTKGRKGGLRATNSGQTNIFKMVKMIMERNFA
PVIIFSFSKKDCEVYAMQMAKLDLNTLEEKKLVDEVFNNAVDVLNDEDKKLPQVTNLLPL
LRRGIGIHHSGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGK
DFRWITSGEYIQMSGRAGRRGLDDKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTY
NMVLNLLRVEEINPEYMLERSFFQFQNQAGIPVLYNKVKELSTAYNTVNVDRYDEISSYH
DIREQLNRLSGEFQSFLTQPEYLVPFLQPGRLVKVKNEIETFDWGIIVNFKKKNPKNPVK
GKTVIVIDILLHLSKNSKEGSPIPCREDEEGEIEVVPVLHNLISQISSLRLYYPXVLKTI
REVKKRFPDGPPLLNPITDMHIEDQAFKDIVKKIEALEKRLYAHSLHKDPNVNVLYEQFL
HKEELAAQLKQAKEEFKQAKSILQMDELKCRKRVLRRMAYCTSADVIELKGRVACELNGA
DELLMTEMIFNGLFNALSVPQMVALISCFVCDEKSNEMPKSTEELSGPLRQMQDLARRIA
KVSTEANLELDEDAYVDRFKPYLMDVIYAWCKGATFLQICKMTDIFEGSIIRCMRRLEEV
LRQLCQAAKGIGNTDLENKFSEAIKLIKRDIVFAASLYL
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattttagcgaagatttgtttgatgtttttgatgagcacggcgatgaagtagaa
atactggacattccaaagaaaatcaagccggaggtaggaataaagcgacattctgacgcc
gatgatgacaaagcaaccataaaaaaattgcgacacgattctgttttaaatgatatcaat
ctagaggaagtggcatgtcgtataacagtgcatactatagaaactgtagaatcttgtatg
cacgagattgctattcctcctgatcaagagtatgtacctttggaacatcaacaaggcaag
ccagccaaagagtataaattcatattagatccatttcagaaggaagcaattttatgcatt
gaaaacaatcagtcagttcttgtctctgcacatacgtcggctggtaaaactgtcgtggct
gaatatgcaatagcgtgttcgcttaaggataagcagagagtaatatatactactccaatt
aaagcattgagtaatcagaaatatagagaattttatgaggaatttaaggatgttggttta
gtaacgggcgatgttactataaatccaacagcgagtgtattaatcatgactactgaaatt
ttgcgaaatatgctctataggggttcagaggtaatgcgtgaagttggttgggtaattttc
gatgagattcattatatgcgtgacaaagagagaggtgtagtttgggaagaaacacttata
ttgctgccagacaatgtgcactatgtatttctttctgctactataccaaacgcacgacaa
ttcgcagaatgggtagcacatttacatcatcaaccttgccatgtagtctctacggactat
agacctactccgttgcagcattatatatttccagttggtggcgatggtatacatctggtt
gtagatgaaatgggtcaatttaaagaagaaaattttaacagagccatggcgtgtctgcaa
aatatgggtgatgcagctaaaggcgacacaaaaggacgcaaaggtggtctacgcgccacg
aacagtggacaaacaaatattttcaagatggtaaaaatgatcatggagagaaacttcgca
cccgtgataatctttagtttttcaaagaaagattgcgaagtttacgcaatgcagatggct
aaactagatttgaacacgttagaagagaaaaaattagtagatgaggtttttaacaatgcg
gtagatgtcctcaacgatgaggacaaaaagttaccgcaagttacaaatttgctgccactt
ttgcggcgtggaataggaatccatcatagtggactcttgccaatcttgaaggagactgtc
gagatattatttggcgaaggtttaattaaagctctttttgctactgaaacattcgcaatg
ggtttgaatatgccagcacggacagtcttgttcacggcacctcgtaaattcgatggcaaa
gactttcgttggatcacgtcaggtgaatacatccagatgtctggtcgcgctggcaggaga
ggtctcgacgacaaagggattgtcatattgatgatagacgagcaagttagtcccgttgtt
ggtaaagctatcgtccaaggaaaaccggatccaatcaattccgcatttcatttgacttat
aatatggttcttaatcttctacgagtggaagagattaatccagaatacatgttggaaaga
agttttttccaatttcagaatcaagctggtattccagttttatacaacaaggtaaaggaa
ttaagtaccgcttacaatactgtgaatgtggataggtacgacgagatttcttcgtatcat
gacatacgtgaacaactcaatcgactgagtggagaatttcaatcatttctaacgcaaccg
gagtatttagttccatttttacaacctggaagattagtaaaagtaaaaaatgaaatcgaa
acgtttgattggggaatcatagtgaattttaagaaaaaaaatccgaaaaatccagtaaaa
ggcaagactgttattgtcattgatattttacttcatttatcaaaaaattctaaagaaggc
agtccaattccttgtcgtgaagatgaagagggcgaaatagaagtagttcctgttttgcat
aatttaatttcacaaatcagttcattaagattatattatccannagtattgaagacaata
cgagaagtgaaaaaaagatttccggacggtccaccgttacttaatcctattacagatatg
catatagaggatcaggcttttaaagatattgtaaaaaaaattgaagcgttagaaaaaaga
ttatatgcacattctttgcataaggatcccaacgtaaatgtactatatgaacaattttta
cacaaagaagaattggctgcgcaacttaaacaagccaaggaagagtttaagcaggctaag
tcgatacttcaaatggacgaactcaaatgtagaaagagagttctaagaagaatggcttat
tgcacatcggcagacgttatagaattaaaaggacgtgtagcttgtgaactgaatggtgcc
gatgaactattaatgactgagatgatttttaatggtctttttaatgctttgagtgtgcca
cagatggtggcattgattagctgctttgtatgcgacgaaaaatcaaacgaaatgcctaaa
agtacagaggaattaagcggtccacttaggcagatgcaggatttggctcgaagaatagca
aaagtatcaacagaagccaatctggaattagacgaggatgcatatgttgacagatttaag
ccgtatttaatggatgttatctacgcttggtgtaaaggcgcaacatttttacaaatttgc
aaaatgacagatatatttgaaggatctattatcaggtgtatgcgacgtttagaggaggtg
cttcgacaattgtgtcaagctgcaaaaggtatcgggaatacagatctagaaaataaattt
agcgaggcaatcaaacttataaaacgggatattgtgtttgctgcgtctttatatttataa
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