Acromyrmex echinatior (Panamanian leafcutter ant): 105149373
Help
Entry
105149373 CDS
T03917
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03022
Basal transcription factors
aec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105149373
09124 Replication and repair
03420 Nucleotide excision repair
105149373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aec03021
]
105149373
03400 DNA repair and recombination proteins [BR:
aec03400
]
105149373
Transcription machinery [BR:
aec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105149373
DNA repair and recombination proteins [BR:
aec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105149373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
105149373
NCBI-ProteinID:
XP_011060045
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MSSTITGKNLLRPNSLQCTNLQEYLKSRSPDTLNKLYHKPPICLAVFCELPVIAKHYVMR
LLFVEQPVPQAVIASWCSKLYFEEHQKVVQVLNELYVWKEASIPGGLPGWTLNSTFKKNL
KIVLLGGGKPWTMSNQLETDSKPRDVAFLDSYALERWECVLHYMVGSQQQEGISADAVRI
LLHAGLMKRDEADGSPIITQAGFQFLLLDTASQVWYFILQYLDTIEARGLDLVECLTFLF
QLNFSTLGKDYSTEGMSEGLLTFLQHLREFGLVYQRKRKAGRFYPTRLALNIATGETKPL
TRDTDKEGYIIVETNYRVYAYTNSNLQVALLGLFCEMLYRFPNVVVSILTRDSVRQALKS
GITASQIVGYLRQHAHSKMIEAGPPILPPTIVDQIKLWENERNRFLFSEGVLYSQFLSQT
DFEVLRDHAVSTGVLIWQSERKRTMVVTKAGHDDVKKFWKRYSKGSS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcacaataaccggcaagaatctgttacggccgaacagtctacaatgcacgaat
ctacaggaatatttaaaatctcgtagtcctgacactctgaacaaattgtatcacaagccg
cctatatgtctagctgtattctgcgaattgcctgttattgctaagcattatgttatgagg
ctgttgtttgttgagcaaccagtaccacaggcagttatagcatcctggtgctccaagctc
tatttcgaggagcatcagaaggtggtacaagtcttgaacgagctatatgtgtggaaggaa
gcgtccatacctggtggactaccaggctggaccttgaatagtaccttcaagaagaactta
aagattgtgttgctgggtggcggcaaaccatggaccatgtctaatcaactagaaaccgat
agtaagccgagagacgtagcctttttggattcttatgcgttggaaaggtgggagtgtgtc
ttacactacatggttggttctcagcagcaggagggcatatctgccgatgctgtaaggatt
cttttacatgccggtttaatgaagagagacgaagctgatggaagcccaattataacgcaa
gctggttttcagtttttgctcttagacacagcttcgcaggtatggtattttattctacaa
tatcttgacacaattgaagcacgtggtcttgatttggtagaatgccttacctttctgttt
caattaaatttttccaccctcggtaaagattacagtaccgaaggcatgtccgaaggactc
ttaacatttttacaacatttaagagaattcggacttgtatatcaacgaaaacgaaaagca
ggaaggttttatccaactcgattagcattaaacatcgctactggtgaaactaaaccttta
accagagatacagacaaagaaggatatataattgtggaaacaaattatcgagtttatgct
tatacaaattcgaacttgcaagttgcattgcttggactcttctgtgaaatgttatatagg
tttccaaatgtagttgtttcgatattaacaagagattcggtaagacaagcattgaagagt
ggaataactgcttctcaaatagtaggctatttgcgacaacatgcacatagtaagatgata
gaagcaggaccacctatattaccgcctacaattgtagatcaaattaaattatgggaaaat
gaaagaaatagatttttgttcagcgaaggagttctatatagtcaatttctttcacaaact
gacttcgaagttctcagagatcatgcagtctcaaccggagtattaatttggcaaagtgaa
agaaaaagaacgatggtggttaccaaagctggccacgatgatgtaaaaaagttttggaaa
cgatattcgaaaggctcaagttaa
DBGET
integrated database retrieval system
