Acromyrmex echinatior (Panamanian leafcutter ant): 105149452
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Entry
105149452 CDS
T03917
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5 isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105149452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105149452
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105149452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
105149452
NCBI-ProteinID:
XP_011060186
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MVVARYRLSASIHTPLLHIPLRCGLKMAMATSQVKGSGWPRRASNSSFEGKVVQNQSVTI
NRTVNLYPLTNYTFGTKEPLFEKDPSVPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPH
VLLLQLGTTFFKLPGGELNTGEDEVEGLKRLLTETFGRQDGVKQEWVIEDTIGNWWRPNF
EPPQYPYVPPHITKPKEHKRLFLVQLQEKGITTSFGTYLINLINIFTLLLFLYLALFAVP
KNYKLVAAPLFELYDNSQGYGPIISSLPQSLCRFNFIYM
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcgcgcgatatcggttatcggcgtccatccatactccattactccatattcca
ttgcgttgcgggttgaaaatggcgatggcgacgagccaagttaagggcagcggctggcca
cgtagagcgagcaacagttcgttcgaggggaaggtggtgcagaatcaatcagttaccatc
aacaggaccgttaatttatatcctttgacaaactatacatttggaacaaaagagccactc
ttcgagaaagatccatcagtaccagcaaggtttcagcgcatgagagatgaattcgacaag
atcggcatgcggagaagcgtagaaggtgtcttactggtacatgagcatggacttccacac
gttcttcttctgcaacttggcacaacattcttcaaattacctggcggagaactcaataca
ggagaagatgaggtagagggcctaaaacggctccttacagagacctttggacggcaggac
ggagtaaagcaagaatgggttatagaagatacaattggaaattggtggcgtccgaacttt
gaaccacctcaatatccgtacgtgccgccacacattacaaaaccgaaagaacacaagaga
ctatttctcgtacagttgcaagagaaaggtataacgacaagtttcggcacgtatttaatt
aatctcataaatatatttactctcttgttatttttatatttagctctctttgctgtaccg
aaaaattataagttagtcgctgcacctttatttgaattgtatgataattcacaaggttac
ggtcctataatctcatctttaccacagtctctgtgcaggtttaatttcatctacatgtga
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