Acromyrmex echinatior (Panamanian leafcutter ant): 105149491
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Entry
105149491 CDS
T03917
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105149491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105149491
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105149491
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105149491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
V-SNARE
FlgM
Motif
Other DBs
NCBI-GeneID:
105149491
NCBI-ProteinID:
XP_011060244
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDEVTNWLANSIDALNLQMDTFESEIESLQAGKKKRIDKDKQDRVDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPSLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNTQASIPTTGSTATIKSNMLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHSNSQAIHSTSNKTSTHNSENNILSSSSTSSVTSNVPQTVTQQHNNNPAPAQTTHV
LHSQQSQNHNSETEMTTPVPPSSSPQSSVSSRSSPMPANSCSPAPSTANGLIPKLPDGSM
SSLKSIAQQVIVRAGLEIPPSEPNRNIFDSAKTSNSSNNNATSEAHIPPLLGVAPLGPVP
LQKEHQLQFQMMEAAYYHMPHPSDSERLRSYLPRNTCTTPPYYQQVQLPHSDTVEFFQRL
STETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINEEYEQGTYIY
FDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacggaa
ggtgtggaaacctttgaagatatttggcaaaaagttcataatgccacgaacagcaatcag
aaagaaaagtacgaggctgatctcaaaaaggaaatcaagaaacttcaaaggttacgcgat
caaattaagagctggatcgcgtcgggtgaaataaaggataagagtacgcttctggactat
cggaagttgattgagactcaaatggaaagatttaaagttgtagaaagagagacaaaaaca
aaagcttattctaaagaaggtttaggcgctgctcagaaattggacccagctcagaaggag
aaagatgaggttactaattggcttgccaattccatagacgctctcaatctgcagatggat
acatttgaatcggaaatagaatcgttacaagcgggaaagaagaaaaggatagacaaagat
aagcaagatagggtggatgaattgaaggcaaagctcgacaaacaccgctaccatatccgt
aaattggagacattattacgtatgcttgataatatgtctgtcgaagtcaatacaatcaag
aggataaaggacgatgttgagtattatatcgaatcttcgcaagatcctgattttgaggaa
aacgaatatatttacgatgatattatcggccttgatgaagttgagttgtcaggagttggt
atcccctcgtcagcaacaacagatagtaacaacagcaatgaaaccggaggaacgccaacc
tcaactaattcctgtacttcgcctataccatcgccgtcgttgagctccactatgcataac
cattcgagcgatagttctacagataatgacaagaaaaccaagcctgtgaaaccaacagca
gtcaggccgctactgaatacgcaagcgagcattccaaccacgggaagcactgccaccata
aaatcgaacatgttatcgagcagcactccaagcaaaaccattcccatgacacctagccat
agctcgcctagttctacgagcaatcacattgccacgactaatgccggcaatttcgccacc
gtagctgcctcgcacagcaattcgcaagccatccattctacctccaataaaacatctact
cacaacagtgagaataatatcttatcatcatcatctacgtccagcgttacgtcgaatgtg
ccgcaaacagttacgcaacagcacaataataatccggcgccggcacagacgacgcacgta
ctgcacagtcaacagagtcagaatcacaatagtgaaacggaaatgactacaccggtaccg
ccatcttcgtcgccgcagtcgtcggtcagcagtagatcctcgccgatgcccgcaaactcc
tgctcgccagcaccgtccactgccaatggtctcatccctaagcttcctgatggaagcatg
tcctctttaaaatccattgcccaacaagtaattgtccgagcaggtctcgagataccacct
tccgagccgaatagaaacatctttgacagtgccaagacgagcaacagtagcaacaacaat
gccacgtcggaagcacacattcctccgctgcttggggtcgcgcccttggggcctgtacca
ttacagaaggagcaccagttgcagttccaaatgatggaagccgcctactatcacatgccg
catccgtctgactcggaaagattacgttcatatttgccgagaaatacatgtaccacgcca
ccttattatcagcaggttcagcttccccattcggatactgtggagttcttccaacgtctt
tctacagaaactttgtttttcatattttattatatggaggggtctaaggggcagtattta
gcagcaaaggctttgaagaaacaaagttggaggtttcacaccaagtatatgatgtggttc
cagaggcacgaggaaccgaaaattattaatgaagaatacgagcagggcacgtacatctat
tttgactacgaaaaatgggggcagaggaaaaaagaaggatttacttttgaatacaagtac
ttagaggacagagatctgaattaa
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