Acromyrmex echinatior (Panamanian leafcutter ant): 105149826
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Entry
105149826 CDS
T03917
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105149826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105149826
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105149826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
105149826
NCBI-ProteinID:
XP_011060819
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MIPSDKLDVISMVEGIPSTYFQASNIGHGIYERCKRSLAKALVNAGGKAGKMADESEDQW
LYGDSTDGKEYTSTNIQSEIQQNDSTLSEVQENLQIREDQKVEGTGEIPSEMQEVTDSLG
DGDEESSSLNNAQEENLEASKNGTRDASSQEDGEAASESDSDDDVHVVIGDIKSAPTYGN
LNIKRGGLLTNTSGVADKLNKQPGKFSIDEFETIGVINGIPAHEFNLDQLEDKPWRQPGA
DITDYFNYGFNEDTWRAYCERQKRMRSESGVGLVLNAGSGSGNPSGMRMPQVAITNDNSK
YSGIMGPKRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTADRREYSRXP
GAGLPPPPFDIPPPGYAGEPTPFYMPETDPYYQSYEPTQDNQWGNDPTWQPTNLAIPMTE
GEDDKDMGPKTIPTMVPPTNIPPLMQPRDQRDGRDRERDRDRDRDRELDSISRDRDKDRD
RDRDREKDSMMRDRDRDSMTRDEDRERDRSRSQYRHKDRHRHRSRSRSRRHKSRSRSPTR
SRKKKSRRSDRERSKEESE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgatcccatctgacaaactagacgtcatcagcatggtggaagggattccttccacctac
tttcaggcttccaacataggacatggtatatacgagcggtgcaagaggtctctcgcaaag
gctttggtaaatgcaggaggtaaggcaggaaaaatggcggatgaaagcgaagatcaatgg
ttatacggggattcaacggacggcaaggaatatacatcgacgaatattcaatcagagatt
cagcaaaatgattcgacactctccgaagttcaggagaacttgcaaattcgggaggatcag
aaagtggaaggtactggtgagataccgtccgagatgcaagaagttactgactcccttggc
gatggtgatgaagaatcttcttcgttgaataatgcacaagaagagaacttagaagcaagt
aaaaatgggacgagagatgcctctagtcaggaagatggcgaagctgctagcgaatctgat
tccgatgatgatgtacatgttgttattggtgatatcaagtcagcaccaacatatggtaat
ttaaatatcaagagaggaggattgctaacaaatacgtctggtgtagcagacaaactgaac
aaacagccaggaaagttcagtatagatgaatttgaaactatcggcgttatcaatgggata
ccagcccatgagtttaatttagatcagttggaggataaaccatggagacaacctggtgca
gatatcacagattatttcaactatggtttcaatgaagacacctggagagcgtattgcgaa
cgtcagaagcgaatgcgaagcgagtctggagtgggattagtcttaaatgcaggtagtggt
agtggtaatccaagtggcatgagaatgcctcaagtggcgataaccaatgacaacagcaaa
tattccggcattatgggtcctaagagagctggcccaccacctggaaggaaaatggcagga
actatagatgttataggaagttctggtttagcttctagaagaaatctggataaatcccca
ccaaaaggaaatgttatacaagttatgactgctgatagaagagagtattctaganctcct
ggagcaggattgccaccgccgccattcgacatacctccaccaggatatgctggagaaccg
acgccattctatatgccagaaactgatccatattatcagagttatgaacccacacaagac
aaccaatggggcaatgacccaacatggcagccaacaaatctggcaatcccgatgactgaa
ggtgaagatgacaaagatatgggacctaagacgatacctacgatggttccaccaacaaac
attccacctctgatgcagccgcgcgatcagagggatggtagagaccgagaacgagataga
gatagggatcgcgaccgggaattggattccataagcagagatagggacaaggatagagat
cgcgatcgtgatagagaaaaggattccatgatgagggatcgcgatagagactctatgacg
cgagatgaagatcgagagcgtgatagatccaggtctcaatatcgacataaagatcgacat
cggcatcgatcaagatcgcgatctcgtagacacaaatcaagatcacggagtccaactcgg
tcgcgtaagaagaaatctagacgctcggatagagagcgttccaaggaagaaagtgaataa
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