KEGG   Acromyrmex echinatior (Panamanian leafcutter ant): 105150091
Entry
105150091         CDS       T03917                                 
Name
(RefSeq) exosome complex exonuclease RRP42 isoform X1
  KO
K12589  exosome complex component RRP42
Organism
aec  Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105150091
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aec03019]
    105150091
Messenger RNA biogenesis [BR:aec03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     105150091
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     105150091
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 105150091
NCBI-ProteinID: XP_011061248
LinkDB
Position
Unknown
AA seq 342 aa
MAETPLSLGEKTFIIHGIDLDLRNDGRSRYQYRPIEIETKLMKHTHGSARLRIGNITDVL
VGVKLEIDTPYAERPEEGKLEFFVDCSANATPAFEGKGGDDLATEISNVLSMAYQTPDAF
DLKQLCIIPHQKCWKIYVDILILQCGGNLFDAVGAAVKAALYNTEIPRVIIAILDGGEPD
IQISDDPYDCIKLDVTNYPVVLTVCKIGDNFVIDPTSEEESCSTASILMSVMPNGKVTSV
VKLGYGSLLPSTLIKMLQVTTVFICLNYYILWLKANFVKFVFDSGFSGWKGYQFQTKRSS
YERTGRGKQARPNEAHIWISQITLRDTLLWILKDTNISFFNS
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggccgaaacccctttgagtttgggtgagaagacatttattattcacgggattgatctt
gatctcagaaatgacggtcgatccaggtatcagtatcgtcctatcgagatcgaaactaag
ctgatgaagcatacccatgggtcagcgagattacgtataggcaatattacagatgtatta
gttggcgtaaaacttgaaattgacacaccgtatgctgaacgaccagaggaaggcaaattg
gaatttttcgtagactgttctgctaatgctacaccggcattcgaaggcaaaggtggagac
gatttggcgactgaaattagcaatgtcctttccatggcctatcagacaccagacgccttt
gatttaaagcagctgtgtataatacctcatcagaaatgttggaaaatatatgtggacatt
ttgattcttcaatgcggtggaaatctattcgacgctgttggtgctgcggtgaaggcggcg
ttgtacaatactgaaattccaagggtgatcatagccatactcgacggtggcgaaccagat
attcagatatcagacgatccttacgactgtattaaactagatgtcacaaattatccagtg
gtattaacagtatgcaagattggtgacaacttcgtgatagatccaacgtcggaagaagaa
tcttgcagtaccgctagtatccttatgtccgtgatgccgaacggcaaggtgacgtctgta
gtcaagctgggatacggcagcttgttgcctagtaccttgattaagatgttgcaggtgaca
acagtttttatatgtcttaattattatatattatggttaaaggcgaattttgtcaaattt
gtttttgactctggattttcaggttggaaaggatatcagtttcaaactaaacgaagctct
tatgaaaggactggaagaggaaaacaagctcggccaaacgaagcccatatttggatttct
cagataacattgcgcgatacattgttatggattttaaaagatacaaatatatcttttttt
aattcttag

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