Acromyrmex echinatior (Panamanian leafcutter ant): 105150091
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Entry
105150091 CDS
T03917
Name
(RefSeq) exosome complex exonuclease RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105150091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105150091
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105150091
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
105150091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105150091
NCBI-ProteinID:
XP_011061248
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MAETPLSLGEKTFIIHGIDLDLRNDGRSRYQYRPIEIETKLMKHTHGSARLRIGNITDVL
VGVKLEIDTPYAERPEEGKLEFFVDCSANATPAFEGKGGDDLATEISNVLSMAYQTPDAF
DLKQLCIIPHQKCWKIYVDILILQCGGNLFDAVGAAVKAALYNTEIPRVIIAILDGGEPD
IQISDDPYDCIKLDVTNYPVVLTVCKIGDNFVIDPTSEEESCSTASILMSVMPNGKVTSV
VKLGYGSLLPSTLIKMLQVTTVFICLNYYILWLKANFVKFVFDSGFSGWKGYQFQTKRSS
YERTGRGKQARPNEAHIWISQITLRDTLLWILKDTNISFFNS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacccctttgagtttgggtgagaagacatttattattcacgggattgatctt
gatctcagaaatgacggtcgatccaggtatcagtatcgtcctatcgagatcgaaactaag
ctgatgaagcatacccatgggtcagcgagattacgtataggcaatattacagatgtatta
gttggcgtaaaacttgaaattgacacaccgtatgctgaacgaccagaggaaggcaaattg
gaatttttcgtagactgttctgctaatgctacaccggcattcgaaggcaaaggtggagac
gatttggcgactgaaattagcaatgtcctttccatggcctatcagacaccagacgccttt
gatttaaagcagctgtgtataatacctcatcagaaatgttggaaaatatatgtggacatt
ttgattcttcaatgcggtggaaatctattcgacgctgttggtgctgcggtgaaggcggcg
ttgtacaatactgaaattccaagggtgatcatagccatactcgacggtggcgaaccagat
attcagatatcagacgatccttacgactgtattaaactagatgtcacaaattatccagtg
gtattaacagtatgcaagattggtgacaacttcgtgatagatccaacgtcggaagaagaa
tcttgcagtaccgctagtatccttatgtccgtgatgccgaacggcaaggtgacgtctgta
gtcaagctgggatacggcagcttgttgcctagtaccttgattaagatgttgcaggtgaca
acagtttttatatgtcttaattattatatattatggttaaaggcgaattttgtcaaattt
gtttttgactctggattttcaggttggaaaggatatcagtttcaaactaaacgaagctct
tatgaaaggactggaagaggaaaacaagctcggccaaacgaagcccatatttggatttct
cagataacattgcgcgatacattgttatggattttaaaagatacaaatatatcttttttt
aattcttag
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