Acromyrmex echinatior (Panamanian leafcutter ant): 105150298
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Entry
105150298 CDS
T03917
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03015
mRNA surveillance pathway
aec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105150298
09123 Folding, sorting and degradation
03018 RNA degradation
105150298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105150298
03041 Spliceosome [BR:
aec03041
]
105150298
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105150298
mRNA cycle factors
Stress granule specific factors
105150298
Spliceosome [BR:
aec03041
]
Complex C
Other components
Complex C specific factors
105150298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_10
RBD_DEAH11
RRM_occluded
Nup35_RRM_2
POP1_C
Motif
Other DBs
NCBI-GeneID:
105150298
NCBI-ProteinID:
XP_011061597
LinkDB
All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MNPGAPNYPMASLYVGNLHTDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFS
AFGNILSCKVTQDESGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGKFIPRKER
QKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFE
DPNSAEQAVLDLNGKEIAEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYV
KNLDDTIDDERLRKEFTPFGTITSAKVMMEEGRSKGFGFVCFSQPEEATKAVTEMNGRIV
GSKPLYVALAQRKEDRKAHLASQYMQRMANMRMQQMGQIFHQPGNAGSYFVPTLPQPQRF
YGPAQMAQIRATPRWPAQPNQVRPNAQTGNSGFASMQAAPFRAAPRAPAAQAGALRNNMS
ARPITGLQAVSNNMQSRSMAGPAVGVSPGQSRPSNYKYTANMRNPPQAAMALPTPSGPSM
QQAVHIQGQEPLTASMLAAAPPQEQKQMLGERLFPLIHDMNPQLTGKITGMLLEIDNSEL
LHMLEHKESLKAKVDEAVAVLQAHQAKQAVAPKKE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctggagcacccaattaccccatggcttcgctctatgtaggcaatctgcacacc
gacatcaccgaggcgatgctgttcgagaaattctcgactgctggacctgtgctgtcgatt
cgcgtatgccgcgacatgatcacccgccgctcgctcggctacgcatatgtcaactttcag
caaccagccgatgctgaacgcgcccttgatactatgaacttcgacattataaaagggcgg
cctatcaggattatgtggtcccagcgcgatccctccttacgcaagtcaggcgttggaaat
gtatttatcaagaacttagataaaaacatagacaataaagcgatgtatgatacgttttcg
gcgttcggtaatatactgagttgcaaggttacgcaagacgaatcaggcgcgtcaaagggt
tacggttttgttcattttgaaacagaggaagcagccaacaaatctattgaaaaagtcaat
ggaatgttgctaaatggcaagaaggtgtatgtcggtaaattcattccacgtaaggaacgc
caaaaggaattaggcgagaaggccaaactgttcacaaacgtctacgtaaagaactttggc
gaggatatgaccgacgacaagctgaaagaaatgtttgaaaagtatgggaccattacaagc
cacaaagtgatgattaaggacgacggcaaatcacgtggcttcggatttgtcgcatttgag
gacccaaactctgccgagcaggcggtgcttgatttgaacggtaaggagattgccgagggc
aagtgtatgtacgttggacgggctcagaagaaagccgagcgtcaacaggaacttaaacgg
aaatttgagcaattgaaaatcgagcggctgaatcgatatcaaggtgtgaatttgtatgta
aagaatttggatgatacgatcgacgatgagcgtctgcgtaaagaatttacgccgtttggt
acgatcacctcagcgaaggtgatgatggaagaaggacgtagcaagggttttggttttgtg
tgcttctcacagccagaggaagccaccaaggcagttactgagatgaacggacgcatcgta
ggttccaaacccctctacgttgctctggcgcaacgtaaggaagatcgtaaggcacacctt
gcctctcaatatatgcaacgcatggcaaatatgcgcatgcagcagatgggtcaaatattc
catcaacccggtaacgccggtagttactttgtacctacactgccgcagccgcagcgattc
tatggacccgcgcagatggcgcaaattcgtgctactccacgctggccagcgcaaccaaat
caagtaagaccgaacgcgcagactggcaactctggattcgcatcaatgcaagctgcacca
ttccgagcggcgccgcgagctcctgccgcacaggctggagctttacgtaataacatgtct
gcaagacctatcacaggtctgcaagctgttagtaacaatatgcagagccgttccatggct
ggaccagccgttggtgtctcgcccggtcagagccgtccatcgaattacaagtacaccgca
aatatgcgcaatcctccacaagcggctatggctctacctacaccgagtggtccttctatg
cagcaggcggttcatatccagggccaagaaccgctcactgcatcgatgctagctgcagca
ccaccgcaggaacaaaaacaaatgttaggagaacgtttattccctctgatccatgacatg
aatccacaactgaccggcaaaatcactggtatgttgttggagatcgataacagtgaactg
cttcatatgctggaacacaaagaatctctgaaggccaaggtcgatgaagccgtggccgta
ttacaggcccatcaagcaaaacaagccgtcgcgccgaagaaggaataa
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