Acromyrmex echinatior (Panamanian leafcutter ant): 105150372
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Entry
105150372 CDS
T03917
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105150372
09122 Translation
03013 Nucleocytoplasmic transport
105150372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105150372
03041 Spliceosome [BR:
aec03041
]
105150372
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
105150372
Spliceosome [BR:
aec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105150372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
ATAD4
Phyto_cutinase
Motif
Other DBs
NCBI-GeneID:
105150372
NCBI-ProteinID:
XP_011061699
UniProt:
F4WXM1
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MGKENESDSVKKRRKSVSANSGTSMKDGDMYKIIINYEEKEAVERLSEDDSECFLATCND
IRAAMSKIAKLKSSGDSNVKDDIRELQIQTSLAFIELKKLNRMEKFRTKSARDSLVAAKS
SVDSRHLHLQNLLYEVMHLKKEVIKCLQFKSKDELIELVSEEEFYKEAPESISRHEITKN
NSHQLRLARLEWELTQRKQLAALCDELTESKKAVASSIETKQTRLDNLAPQLRSILEASK
PLQESLGLPLDKIRQEHQKASLLASPLYVLYAKASAYRDAYDSTLLVKVEGDEDEAKRAN
NHDGLQESDSDPENQLESIVEETPVHKKRHHRLSREARQEEKRSKLLQRHPLHVKILITL
KNETRLTLHFFYMVYLKVVTVESKLETEDLGGISAGDMLVSESVLRELYPRDLGLESPNP
ANQYQLSRHNLGSFSSLGLGIPYRWAQRMAGLHFVSCEMTEQQQKLTSQELAQDCVESVL
KEIKRRIKARLDLCMEIRQLESGNLPIFISMTDPVPQKISTSLHRFTTMTWKSYSNYVAS
PEFYQRGLVLSVDIFYEAILRRGSSELVARIAIKPDYPKIAPVFSISISPTVPASADIIR
DIEREVNVMWTKSPTLTAQIQRLRACFDIYLETESMAPKEKIFFYPVRGRTRARPYKYLS
LGGGIFTHR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagagaatgaatcggatagtgtgaaaaaaagaagaaagtctgtgagtgcaaac
agcggaacttcaatgaaagacggagatatgtataagataataattaattatgaagagaaa
gaagctgttgaaagattgtctgaggatgattccgaatgctttctggcaacttgtaacgat
attcgagcggcgatgagtaaaatagcaaaattaaagtccagtggtgactcaaatgtaaaa
gatgatattcgtgagctgcaaatccaaacgtcactagcttttatagaactgaagaaacta
aatcgcatggaaaagtttcgtacaaaatctgcacgagactctctagtggctgcaaagagt
agcgttgatagcagacatttacatttacagaatctattgtacgaagtgatgcatttgaag
aaagaagttatcaaatgtcttcaattcaaatctaaagatgaattgatagaacttgtttca
gaagaagaattttataaagaagctccagaaagtatctcgcgacatgaaataacaaagaat
aattctcatcaattgagactggctcgtttagaatgggaactgacacaacgaaagcaattg
gcggcattgtgcgatgaattgacagagagtaaaaaagcagtagcatccagtattgaaacg
aaacagactcgtttggacaatcttgcgccgcaattgcgctctatattggaagcaagcaaa
ccgttacaagaaagtcttggattgccattggataaaattcgccaggagcatcaaaaagca
tcattgcttgcatcaccgctctatgtgttgtatgcaaaagcgtctgcttacagagatgct
tatgatagtacgttgctagtcaaggtggaaggtgacgaggatgaagcaaaacgcgcaaat
aatcatgatggtttgcaagagtctgattcggatcctgagaatcagttggaaagtatcgtg
gaagaaacacccgtgcataagaaaaggcatcacagattatcccgggaagcgaggcaagaa
gagaaacgatctaaactattacagcgtcatccgttacatgtgaaaatacttatcacatta
aaaaatgagacaagactgactcttcactttttttacatggtatatttaaaagtcgttaca
gtagaatcaaaactcgaaacagaagacttgggaggtattagtgctggagacatgctagta
tccgagtcggttcttcgcgaattgtatccacgggatttaggattggagagtccgaatcct
gccaatcagtatcagctgtcgcggcataacttgggatcgttttcgtctttgggactaggc
attccttacagatgggcgcaaagaatggctggtctacactttgtttcgtgtgagatgacc
gaacaacaacaaaagctgacgagtcaagaattggcacaagattgtgtggagagtgtgttg
aaagaaattaaacggcgcataaaagcgaggctggatctatgtatggaaatacgacaatta
gagtccggcaacctgccaatatttatcagcatgacggatcccgtgccacaaaaaatctca
acgtctttgcatcgattcacaactatgacctggaaaagttattcaaattatgttgcttca
ccggaattttaccaacggggattagtgttgtctgtagacatcttttacgaagctatactt
cgtcgcggcagtagcgaacttgtggccaggattgctatcaagccagattatcccaagata
gcaccagtatttagcataagcataagtccaacagtgccagcgtccgccgatatcattaga
gatatcgaaagggaagtcaatgtgatgtggaccaagtcccctacattgacggcgcaaata
caacgactgagagcatgtttcgacatctatctggaaactgagagcatggcgccgaaggaa
aagatattcttctatcctgtaagagggcggactcgcgctcggccatacaaatatttatcg
ttgggcggaggtatattcactcatcgttaa
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integrated database retrieval system
