Acromyrmex echinatior (Panamanian leafcutter ant): 105151175
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Entry
105151175 CDS
T03917
Name
(RefSeq) DEAD-box helicase Dbp80 isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
aec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105151175
03015 mRNA surveillance pathway
105151175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105151175
Enzymes [BR:
aec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105151175
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105151175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
105151175
NCBI-ProteinID:
XP_011063029
UniProt:
F4X043
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MASTKVDWGQCADEQDKLASKVTSLNLDKPNSTSIPAPTVKDGDSKSDDDTSEEQISPAE
KSLLQKIIRKGLVETTKDIEIQRQDPNSPLYSVKTFDALHLKPALLKGVYALGFNAPSRI
QETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVDVTKEYPQVLCLSPTYELAIQT
GEVAAKMSRFCPEIKIKYAVRGEEISRGSKISEHIIIGTPGKVLDWGQKFKFFDLSKISV
FVLDEADVMIATQGHQDQCIRIHKLLPRACQMMFFSATYEPEVMNFAEIIVSNPLIIRLL
REEESLDNIKQYYIRCKNVDEKYTAITNIYGVITIGQAIIFCHTKKTASWLAGKMTKDGH
AVAILSGDLTVEQRISVLDRFRAGLEKVLITTNVLARGIDVEQVTIVVNFDLPMDQNRQA
DCETYLHRIGRTGRFGKSGIAINLIDSDHAMELCRTIEKHFGKKIHYLDAEDADEIEKIG
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgactaaggtcgactgggggcaatgcgccgatgaacaggataaattggcgtcg
aaggtgacaagtttgaacttggataaaccgaactcaacgtctatccctgctccaactgtg
aaagatggagattccaagagtgatgacgatacgtcagaagaacagatctcaccagcagag
aagtcgctcctacaaaagatcataaggaaaggattagtggagacaacgaaggatatagag
attcaaagacaagacccaaattctccgttatacagtgtcaaaacctttgatgcacttcat
ctcaaacctgccttgttaaaaggggtttatgctttgggattcaatgcaccttctagaatt
caagaaactgctttacctactttactcgctgatccaccacaaaatatgatcgcacaatct
cagtctggtacgggtaagacagctgcgtttgtacttgccatgttgagtcgggtagatgtt
acgaaggagtatccacaggtactttgtttgtcaccaacttatgaactagcgatccaaacc
ggcgaagtagcggcaaagatgtcgcgcttctgtcctgagataaaaataaagtacgctgta
agaggagaagaaataagtcgtggttcgaagattagtgaacatattattataggaactcca
ggtaaagtattggattggggacaaaagttcaaattcttcgatttaagcaaaatatctgta
tttgtattggacgaagctgacgttatgattgctacgcaaggccatcaagatcagtgtatc
cgtattcacaaattactgccacgtgcatgtcaaatgatgttcttctctgcgacatacgag
ccggaagtaatgaactttgcagagattatagtcagtaatccgctaataatacggttgtta
agggaagaagaaagtttagataatatcaaacaatactatattagatgcaaaaatgtagac
gaaaaatacacagctatcactaatatttatggcgtgattactattggacaagcgattatt
ttttgtcatacgaagaaaacagctagttggttggcaggaaaaatgacaaaagatggacat
gcggttgcaatattatctggtgacttgacagtggaacaaagaatttctgtgctggataga
tttagagcaggactcgagaaagttctcatcactacaaatgttttagctagaggcatcgat
gtagaacaggtaacgatagtagtcaatttcgatttgccaatggatcaaaatcggcaagcc
gattgcgaaacatacttacacagaatcggaagaacgggacgattcggcaagtcagggatc
gccattaatttaatcgactcggatcacgcgatggaattgtgccgaactatagaaaaacac
tttggcaagaagatccattatctcgatgcagaagatgcagatgaaatcgagaaaatcgga
gcctag
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