Acromyrmex echinatior (Panamanian leafcutter ant): 105151294
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Entry
105151294 CDS
T03917
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105151294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aec03041
]
105151294
03009 Ribosome biogenesis [BR:
aec03009
]
105151294
Enzymes [BR:
aec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105151294
Spliceosome [BR:
aec03041
]
Complex A
U2 snRNP components
U2 related factors
105151294
Complex B
105151294
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
105151294
Ribosome biogenesis [BR:
aec03009
]
Eukaryotic type
90S particles
Helicases
105151294
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
SRP54
ResIII
T2SSE
Flavi_DEAD
AAA_7
ABC_tran
AAA_30
AAA_16
AAA_25
TsaE
Motif
Other DBs
NCBI-GeneID:
105151294
NCBI-ProteinID:
XP_011063229
UniProt:
F4X0J9
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MSKRRIEVVDPYVKRKATDNTVANNATTPGTTAAKSQVQFNPYTMLPYTPRYYELYKKRI
TLPVFEYRTDFMRLLSQHQCIVLVGETGSGKTTQIPQWCVEYSRSIGSKGVACTQPRRVA
AMSVAQRVSEEMDVALGQEVGYSIRFEDCSSPRTVLKYMTDGMLLREGMSDPMLDAYQVI
LLDEAHERTLATDLLMGVLKEVIKQRPDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTH
PVEIFYTPEPERDYLEAAIRTVIQIQMCEEIPGDLLLFLTGQEEIEEACKRIKREMDNLG
PEVGELKCIPLYSTLPPNLQQRIFEPAPPTKTNGAIGRKVVVSTNIAETSLTIDGVVFVI
DPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKNEMQDN
TYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALDLLNYLAALDDDGNLTD
LGAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNESKKAADDAKMKF
AHIDGDHLTLLNVYHSFKQHMDDVQWCYDNYVNYRSLKSGDNVRQQLSRIMDRFVLKRTS
TDFNSKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQVVQLHPSSCLDHKPEWVIYN
EFVLTTKNYIRTVTDIKPDWLLMIAPQYYDLQNFPQCEAKRQLELTQAKLDSKQYQEGF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgcaggattgaggtcgtggatccctatgtcaaaaggaaagccacggacaat
accgttgccaacaatgcaacaactccagggacgacggcagcaaaaagccaagtacagttc
aatccatataccatgctgccatatacgccgagatactatgaactttacaagaaaagaata
actttacctgtatttgagtatcgtactgatttcatgagattgttgtcccagcatcaatgc
attgttcttgttggagagacaggttctggtaaaactacacagataccacaatggtgtgta
gagtattcaagaagtattggatccaaaggagtcgcctgtacacagcccagaagagtagct
gcaatgagcgttgctcaaagagtttcagaagaaatggatgttgccttaggtcaagaagta
ggatacagcattcgttttgaagattgtagttcaccgaggactgtgttgaagtacatgacc
gacggtatgttgcttcgggaagggatgtctgatcccatgttggatgcctatcaagtgata
ctgctagacgaagctcatgaaagaacgttagctactgacttgctaatgggtgttttgaaa
gaagtgattaaacagagaccagacttaaaacttgtgattatgagtgctaccttggacgct
ggaaagtttcaacagtattttgataatgctccacttatgaacgtacctggtagaacacat
ccagttgagatattttatacaccagagccagagagggactacttggaggcagcaataaga
actgttattcagatacagatgtgtgaagaaattcctggggaccttttgctatttttaact
ggtcaagaagaaattgaagaagcttgcaagagaataaaaagagaaatggacaatttggga
cctgaagttggtgaattaaagtgcataccattgtactcaacactgccgccgaatcttcaa
caaagaatatttgaacctgctccgcctaccaaaactaacggtgctatcgggcgcaaagtc
gtcgtttcgaccaatatcgcagagacatcgttgactattgacggagttgtctttgtcata
gatcctggttttgccaagcaaaaagtatacaatcctaggattcgtgtcgaatctctttta
gtgtcacctattagtaaggcttctgcgcaacagagagccggtcgtgctggtagaacaaga
cctggaaagtgtttcagattatacacagaaaaagcatacaaaaacgagatgcaggataat
acctatcctgagattttgcgttccaatcttggaagcgtcgtattacaattgaagaaactt
ggcatcgatgatttagtgcattttgactttatggatccacctgcgcccgaaactcttatg
agagctttggaccttttgaattatttagcagctctggacgatgatggaaatttgacagat
ctcggcgcagtaatggcagaatttcctttggatcctcaattagcaaagatgcttatagct
tcttgcaatcataattgcagtaatgagatactcagcatcactgctatgctttcagtccca
cagtgctttgtgaggccgaatgaatcgaaaaaagcagcggatgatgcaaaaatgaaattt
gcacacattgatggtgaccatttgacgctactgaatgtatatcattctttcaaacaacat
atggatgatgttcaatggtgttacgataattacgtaaattatcgatcattgaagagcgga
gataatgtaagacaacagttaagtagaataatggatagatttgtattaaaacgcacttcg
acggacttcaattcaaaagattattacattaacatcagaaaagctctcgttaatggtttc
ttcatgcaggtggcgcatttagagagaacaggacattacctaactatcaaagataaccag
gtagtacaacttcatccgagcagttgtctcgatcacaaaccagaatgggttatttataat
gaatttgtgcttactactaaaaattatatcagaacagttactgatattaaacctgattgg
ttactcatgatagcaccacaatattatgatctacaaaatttccctcaatgtgaagcaaaa
agacagctcgagctcactcaggcgaaattagattctaaacagtatcaggaaggcttctaa
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