Acromyrmex echinatior (Panamanian leafcutter ant): 105151634
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Entry
105151634 CDS
T03917
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
aec03015
mRNA surveillance pathway
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105151634
09122 Translation
03013 Nucleocytoplasmic transport
105151634
03015 mRNA surveillance pathway
105151634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105151634
03041 Spliceosome [BR:
aec03041
]
105151634
Enzymes [BR:
aec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105151634
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
105151634
Spliceosome [BR:
aec03041
]
Complex C
Other components
EJC/TREX
105151634
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
105151634
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105151634
NCBI-ProteinID:
XP_011063765
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQVVDGSGDVPSKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEMLKTVCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHSKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLNGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatgatgatcttttggattatgaagacgaagaacaaactgagcaggtagtc
gatggaagcggagatgttccatctaaaaaagaagtcaaaggtacatatgtctctatccac
agcagtggatttagagatttccttttgaagccagaaattcttcgtgctattgtcgactgt
ggctttgaacatccatctgaagtacaacatgaatgtattcctcaagcagttcttggcatg
gatatactgtgccaagcaaaatcgggtatgggaaaaacggctgtatttgtattagctact
cttcagcaactggaattaacagagaaccaagtctatgtcctagtaatgtgtcacactcga
gaattggcttttcaaatcagtaaagaatatgagaggtttagcaaatacatgccacatgtg
aaagttggcgtattcttcggtggtttacctatccaaaaagatgaagagatgttgaagact
gtgtgtcctcatattgttgttggcacccctggtcgtattcttgctcttgtacggaataaa
aaactgaatctaaaacacctgaaacattttattcttgacgaatgtgacaagatgcttgaa
ttattagatatgcgccgggacgtacaggaaatattcagaagcacaccgcacagcaaacaa
gtcatgatgttcagtgccacgctgtccaaggagatacgtcctgtctgcaaaaaattcatg
caagatcccatggaggtctatgtcgatgacgaggcgaagctcaccttgaacggtctccag
caacattacgttaaattgaaggaaaacgagaagaacaagaagttgtttgaactacttgat
gttcttgagtttaatcaggttgtcatatttgtgaagtctgtacaaagatgtatggcttta
gcacaacttttaacggaacaaaatttccctgcgattgggattcatcggggtatgacgcaa
gaggagcggttatccagatatcaacagttcaaagattttcagaaacgtattttggtggcg
acaaacctgtttggacgtggtatggatatagaacgtgtaaacattgtatttaattatgat
atgccagaagactccgatacatatttgcatagagttgcgcgtgctggtcgttttggtaca
aagggtcttgccattacattagtaagcgatgaaagcgatgcaaagatattgaatgatgtt
caagaaaggtttgacgtaaatattacagaattaccggacgaaatcgatctcgcttcatac
attgagggacgatga
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