Acromyrmex echinatior (Panamanian leafcutter ant): 105151693
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Entry
105151693 CDS
T03917
Name
(RefSeq) pre-mRNA-processing factor 6 isoform X1
KO
K12855
pre-mRNA-processing factor 6
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105151693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aec03041
]
105151693
Spliceosome [BR:
aec03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105151693
Complex C
U5 SnRNP specific factors
105151693
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
TPR_16
TPR_17
Suf
HAT_Syf1_CNRKL1_N
CFAP70_TPR_C
TPR_2
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
TPR_8
TPR_11
TPR_15
TPR_CcmH_CycH
TPR_1
TPR_6
Iml2-TPR_39
ARM_TT21_N
TPR_MalT
ARM_TT21
ARM_TT21_4th
TPR_21
TPR_Slam
ChAPs
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
105151693
NCBI-ProteinID:
XP_011063836
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MQKRRINLILLVFESDSGLRCIKYLEITHIYNLRTTKMATSSVSLNTRNKKHFLGVPAPL
GYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPTKRTKKKEEEEEDEEDLNDSNYDE
FSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRKEYREKRLREELERYRQERPKIQQ
QFSDLKRELVNVTEDEWKNVPEVGDARNRKQRNPRAEKFTPLPDSVLARNLGGETSTSID
PSSGLASMMPGVATPGMLTPTGDLDLRKIGQARNTLMNVKLNQVSDSVEGQTVVDPKGYL
TDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQAARNLIMK
GCEVNPTSEDLWLEAARLQPPDTAKAVIAQSVRHIPTSVRIWIKAADLETEVKAKRRVYR
KALEHIPNSVRLWKAAVELEEPEDARILLSRAVECCPTSVDLWLALARLETYDNARKVLN
KARENIPTDRQIWTTAAKLEEANGNKHMVEKIIERAISSLSANGVEINREHWFKEAMEAE
KAGAVHCCQVIVKAIIGFGVEEEDRKHTWMEDAEACAQQGALECARAVYAYALTTFPSKK
SIWLRAAYFEKTYGTRESLETLLQRAVAHCPKSEVLWLMGAKSKWLAGDVPAARGILSLA
FQANPNSEEIWLAAVKLESENSEYERARRLLAKARASAPTPRVMMKSAKLEWALNNLDAA
LHLLKEALEAFDDFPKLWLMKGQIEEQQGYLDKAIDTYNQAIKKCPNSIPLWCLLARLEH
RKNQVTKARSVLEKARLKNPKNAELWLEAIRNELKKGGARDMANTLMAKALQECPTSGLL
WAEAIFMEPRPQRKTKSIDATKKCEHDPYVLLAVSKLFWCEHKISKCRDWFNRTVKIDSD
LGDAWAYFYKFELLNGTEEQQEDIKKRCIAAEPHHGENWCKVSKNITNWCLSIDQILVLV
AKELPIPI
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaacgtcgaataaacctaattttattggtttttgagtctgattccggcctaaga
tgtattaagtatttggaaatcacccatatatacaacctaagaaccaccaagatggcaact
tcttcggtttcattaaatacgcggaataaaaagcattttttgggtgtaccggcacccttg
ggatatgttgctggtgttggcagaggagcaacgggatttacaacacgatctgatattggt
cccgctcgagatgccaatgacgtttcagatgacagacatgctccacccacgaaacgtaca
aaaaagaaagaagaagaggaagaagatgaagaagatttgaacgattcaaattatgatgaa
ttttcaggatatggaggttctctttttagtaaagatccttatgataaagatgatgaagaa
gcagatgctatttatgaggctattgacaaacgaatggacgaaaaacgtaaagaatatagg
gaaaagcgtctcagagaagaattggaacgttatcgtcaggaacgtcccaagattcaacag
caattctcagacttaaaaagagaattggttaatgtaactgaagatgaatggaagaatgtt
cctgaagtaggagatgctagaaatcgaaagcagcgtaatccaagagcagaaaagttcact
ccgttgccagattctgtactggcgagaaatttaggaggagagacatctactagcattgat
ccatctagcggtctcgcttccatgatgccaggtgtggcgacacctggtatgttaactcct
acgggggatcttgatctcaggaagattggacaggccagaaacacattaatgaatgtcaag
ctgaatcaggtttctgattctgtagaaggccaaactgtagttgatccaaaaggatacctt
acggatttacagagtatgatacctacttatggtggagacataaacgacataaagaaagcc
agattattgttaaaatccgtcagagaaactaatcctaatcatcctcctgcatggattgca
tctgcgcgtctagaagaggtgactggaaaggttcaagcggcaagaaacttaataatgaaa
ggatgcgaagttaaccctacttctgaagatctgtggttagaagctgcaagactgcagcca
ccagatacagcaaaagcagtaatagcacaatcagtgcgccacattccgacatctgtgaga
atttggataaaggccgcggatttagaaacggaagtaaaagcgaagcgaagagtatatcga
aaggcactagaacatatcccaaattcggtccgactgtggaaagcggctgttgagttagaa
gaacccgaggatgcacgaatcttgctcagtcgtgcggtcgaatgttgtccgactagtgta
gatttgtggcttgctcttgctagattggaaacttatgataatgcaagaaaagtcttaaat
aaagctagagagaatatcccaaccgatagacaaatttggactactgctgcaaaattggaa
gaagcaaatggcaataaacatatggtggagaagattatcgaacgtgctatatcttcgtta
agtgcgaatggagtagagatcaatagggaacattggtttaaagaagctatggaagctgaa
aaagcaggagcagtgcactgttgtcaagttattgttaaagctattatcggttttggagta
gaagaagaggacagaaaacatacttggatggaagatgctgaagcttgcgctcaacaagga
gcattggaatgtgccagagctgtctatgcttatgcattaacgacatttcctagtaagaaa
tcaatttggctacgtgcagcttattttgaaaagacatatggcacgcgggaatctttggaa
actttattacaaagagcagtcgctcattgtcccaagagcgaagtgctttggttgatgggt
gcaaaatcaaaatggctagctggcgatgtaccagcagctagaggtattttgtctctcgcg
tttcaagctaatccaaattccgaagaaatttggttggcagctgtgaaactcgaatctgaa
aattcagaatatgagagagcacgacgtttattggcaaaagccagagcatccgctccgacg
cctagagtaatgatgaaaagcgccaaattggaatgggctcttaataatcttgacgcagca
ttacatctattaaaagaagctctcgaagcctttgatgacttccccaaattgtggctaatg
aaaggtcaaattgaagaacaacaaggatatttagacaaagcaatagatacatataatcaa
gcgatcaagaaatgtccaaattcgatacctttgtggtgtctgctagcgcgattggagcac
aggaaaaatcaagtgactaaagcgcgttcagttttggaaaaagcaagacttaaaaatcct
aaaaatgcggagttatggctggaagctatacggaatgaattaaaaaaaggtggtgcgcgc
gatatggcaaatacattaatggctaaagcattacaagaatgtcccacatctggactgctc
tgggcagaagcaatttttatggaacctcgacctcaacggaaaacgaaaagtatcgatgcc
actaaaaaatgcgaacatgatccttacgttcttttggcagtatcaaaattattttggtgc
gagcacaagatttcgaagtgtagagattggtttaataggacggtgaaaatagattcagat
ttaggcgatgcatgggcgtatttttacaaattcgaactactgaatggtacagaagaacag
caagaagatataaaaaagagatgtatagccgcagaacctcatcatggcgaaaattggtgc
aaagtttccaaaaatataacaaattggtgtctgagtatagaccaaatcttagtgctagtt
gcaaaagagttacccattcctatataa
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integrated database retrieval system
