Acromyrmex echinatior (Panamanian leafcutter ant): 105151743
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Entry
105151743 CDS
T03917
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105151743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aec03400
]
105151743
DNA repair and recombination proteins [BR:
aec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105151743
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
DUF6870
Rbsn
Motif
Other DBs
NCBI-GeneID:
105151743
NCBI-ProteinID:
XP_011063921
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MIGAEPHKMEGVILNKSHFETFVRDLLLVKQYRVEVYINLGSSKNQNWILEYKGSPGNLS
HFEDILFGNNDIAVGVSVIAVKLGIEGKSRVVGLSCVDVVSTLISVIEFQDNESFSNLES
LIVTLAPKECLLIQGEGSFEFQTLKQLMERSNVMVTLRKKNEFVSDSIIDDLNKLIKFKK
GQKQNAQSLPEVNLNLAMSATSALIKYLDLTSDEGHMNQFKLNQIEQSRYIRLDSAAMKA
LNIEPHTDTIPTLHGNSVASILTLLDKCRTAQGHRLIAQWVRQPLKDLSLIKERHDIVEL
LVKNNELRSTLSDDYLKRIPDLQQLAKKLARKKLTLQDCYKIYLCISYLPKLLEQLLLEK
NVTTLNTMIIEPLKELIEDMDKFQQLIEQTIDLDAAEKGDFMVNPGFADDLKTLKDAMDE
LEETIQKQLSKAANDLCMEAGKMIKLECNQQLGYYFRITLKEEKILRNKKHYTILDSNKA
GVRFRNNKLNELNDDFLDARNKYLERQKDVIVEIVEIAAGYSETVRSIGGVLACLDVLTA
FSSAAVSANKVYVRPKMVPSEEGELNLIQVRHPCLEMQQGVDYIANDIIFKRGKSTYIRS
VGVTALMAHIGSFVPCDEATISLLDCILARVGADDSQLKGLSTFMMEMIETAAILKTATC
NSLVIIDELGRGTSTYEGCGIAWSIAEHLARNIKSYCLFATHFHEITKLAEEIPAVKNQH
VTALVEDDKLTLLYKVMPGICDQSFGLHVAKMANFPSDVIEFAKRKQAELEDYQGVTFEG
SDNPQKKQKVIQEGEVLISQFLTKCKALDSSLSDADLESQVLSLKEDILSHKNPYVDALL
AAY
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgattggagctgagccgcataaaatggaaggagtcattcttaataaaagtcatttcgag
acatttgtgcgcgatttactattagtaaagcaatacagagttgaagtttatattaatcta
ggctcgtctaaaaatcagaactggatcttggagtacaaaggttctcccggcaatctatct
catttcgaagatatcttgttcggcaataatgacattgctgtgggtgtgtccgtaatagct
gtgaaattgggtatagaaggaaagtccagagttgtcggtttaagttgtgtagacgtcgtt
tcaactttaatttcagtgattgaatttcaagataatgaatcattttcgaatctggaatcg
ctcattgtaactctcgctcccaaagaatgtttattaattcagggtgagggcagttttgag
tttcaaactcttaagcaactaatggaaagaagtaatgtgatggttactttgcgaaagaaa
aatgaatttgttagtgactcgatcatagatgatttaaacaaattgataaaatttaaaaaa
ggacaaaaacagaatgcgcaatcgttgcctgaagtcaacttaaatttagctatgtctgca
acatctgctctcattaaatatttagatttaacatcagacgaaggacacatgaatcagttt
aagttaaatcaaatcgagcaatcacgatatataagattggattctgcggcaatgaaagct
cttaacatcgaaccacatactgatacaattcccaccttacatggaaattcagttgccagt
attttaacattgttagataaatgtagaactgcacaggggcatcgattgatagcacaatgg
gtccgacagcctcttaaagacttatctttaataaaggaacggcatgacatcgttgaatta
ttagtgaaaaataatgaattaagatccactcttagtgatgactatttaaaacgtatacca
gatttgcaacagctcgcaaagaaattagctagaaagaaattgacattgcaagattgttac
aagatctatctgtgcatatcatatttgccaaaattattggaacagcttttattagaaaaa
aatgtgacaacattaaatacaatgataatagagccactaaaggaacttatagaagatatg
gataaatttcaacaattgatagagcagacgatcgatttagatgctgctgagaagggtgat
tttatggtcaatccaggatttgcagatgatttaaaaacattaaaagacgcaatggatgaa
ttagaggaaactatacaaaaacaactcagtaaggcagcaaatgatctttgcatggaggca
ggaaaaatgataaagttagaatgtaatcaacaacttggctattattttcgtatcacatta
aaggaagagaaaatacttagaaacaaaaaacattacactattctggattctaataaagct
ggagtaagattccgaaacaataagttaaacgaattgaatgacgattttctagatgccaga
aataaatacttggagagacagaaagatgttatcgtagaaattgtagaaattgcagctggc
tatagcgaaacagtacgttctattggtggcgtgctggcatgtctcgatgttcttactgca
ttttcttctgcagcagtaagcgctaataaagtatatgtgcgtcccaagatggtcccaagc
gaagaaggtgaattaaatctcattcaagtcagacatccgtgtttagaaatgcaacaagga
gttgattacattgctaatgatattatttttaagagaggtaaaagtacttatattagatca
gttggtgtaactgcattaatggctcatattggtagtttcgttccttgcgatgaagcaact
atatcgttactggattgtatattggctcgagtaggagctgatgattctcaactaaaagga
ttgtcgacttttatgatggaaatgatagaaacagctgccattttaaaaacagcaacatgt
aattctcttgtaattatcgatgaattgggcagaggtacatctacttacgagggttgtggt
atagcgtggtcaatagcagagcatttggcaaggaatattaaatcatattgtctatttgca
acacacttccatgaaatcaccaagttggccgaagaaatacccgctgtaaaaaatcaacac
gttaccgctcttgtcgaagacgataaattgacgttactttataaagtaatgccagggatt
tgtgatcaaagttttggtcttcatgtcgctaaaatggctaattttccatcagatgtaata
gagtttgccaaaagaaaacaagccgaacttgaagattatcaaggcgtaacttttgaagga
tctgataatccccaaaagaagcagaaagttattcaggagggtgaagttcttatttcgcaa
tttcttacgaagtgtaaagctttggactcgtctttatctgatgccgatctagaaagtcaa
gtattatcactgaaagaagacattctatcccataaaaatccttatgttgatgctttactt
gccgcttattaa
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