Acromyrmex echinatior (Panamanian leafcutter ant): 105151934
Help
Entry
105151934 CDS
T03917
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105151934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aec03009
]
105151934
Ribosome biogenesis [BR:
aec03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105151934
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Utp12
DSE1_N
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR41
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ASA1
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_DCAF4
CFAP251_N
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_ACSF4
WD40_like
PAC11
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_MIP2
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
105151934
NCBI-ProteinID:
XP_011064222
UniProt:
F4X2C8
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MGLTKQYLKYVPAGNANIIASPRCNIVFVKLDGQEGRFVAAAACEHVYIWDLRLGEKAQV
LSGEKVCVTCLAASPDKKHIAVGYADGTVKTFDLSTGENISIFVGHKSEITTLAYDVLGH
RLATGSKDTDIIVWDVVAETGICRLNGHKGVITKLIFMKEHNIIISASKDTFVKFWDLDT
EHNFKTLVGHKSEVWSFVLMNDDHYLITGCNDMELRVWKITFLNDRNIELDNAVGTIDTN
EENEESVDTDMKYPIKCEKAGSILRTTRGRVVSLEVDSTCKVLGCHGVGNSIELFYLLSE
DIIKNRFTKRLKKERRKAQKEENAAEKELPTTPSLKDEIQRLPVIRVSGKTKGLDLVIGR
GNELRVCVGINNNSIELHSLFMDEKNQEVKHLRSITAHGHRTDVRAICFSSDNLAFATAS
GDSVKLWNRPTLSSLRTVQCGYALTITFVPGDRHLIVGLKDGKMLIIDISSGDILEEISA
HSKELSSITLFPDLKGVASGGGDQTVKFWNFELIQDSDNQIKAKVLSVLHVRTLKLEESV
LCVRISPNNRFLAVSLLNSTIKIFFLDTFKFFLSLYGHELPVLCMDISSDSTLIATGSQD
RNIKIWGLDYGDCRRSIFAHDDSVTGLSFVPGTHYFFTSGKDGKIKQWDADIYKKIITLQ
SHFGESWNCCVSPNGAYVASCGSDGVVRLYEKTREPLVLQDVAEEEREQQENELITGEST
AVLGQKQQALPSKKTVSSEKAAELILECLEISNQYETELSKTIPTDKAPPLPLLMQAYNC
TNTEDFLLEIFKRVRASELEETLLLLPFSAACDILQRLPNLLKNNYHTELLARLALCLIQ
AHHGPIVANQNLLPTLEIVKKLAVEKISVLRDTIGLNLHGMMYLQRIFEEQEGIKFFRDA
TKNIEHKKKIRRNKEKAIKRAIMNL
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaccaagcagtatttaaaatatgtaccagcaggtaatgcaaatataattgcg
agtcctcgatgtaatattgtctttgtaaagttggatggtcaagaaggtagatttgtagct
gctgctgcatgtgaacatgtatacatttgggatctgcgacttggagaaaaggcacaagta
ttatctggagaaaaggtatgtgtaacatgtctggctgcatcacctgataaaaaacatatc
gcagttggttacgcagatggcacagtaaaaacctttgatttaagtactggtgaaaatatt
agcatatttgtgggacataaatctgaaataacaaccttggcatatgatgtattaggacat
agattagccactggttcgaaggatacagatattattgtttgggacgttgtggcagaaact
ggaatatgtcgattaaatggacataaaggtgttataaccaagttgatattcatgaaggag
cataacattattattagtgcaagcaaagatacatttgtgaagttttgggatctagacacg
gaacataattttaaaacccttgttggacataaatcagaagtgtggagtttcgtcttaatg
aatgacgatcattatttaataacaggatgtaatgatatggaactacgtgtttggaaaata
acatttcttaatgacaggaatattgaattggataatgctgttggtacaatagataccaac
gaagaaaatgaggaaagtgtggatacagatatgaaatatcctataaaatgtgaaaaagct
ggaagcatattaagaaccacgagaggtcgagttgtttcgttagaagttgattccacatgc
aaagttcttggatgccatggagtgggaaattccatagaattattttatctactgtctgaa
gatataataaaaaatagatttacaaaaagattgaagaaagaaagacgaaaggctcagaaa
gaagaaaacgccgcagagaaagagctacctactacaccatctctaaaggatgagatacaa
cgattgcctgttattcgagtatctggcaaaacaaaaggacttgatttagtaataggcaga
ggaaatgaactgagagtgtgtgttggaatcaataacaattcgattgaattacattctttg
tttatggatgaaaaaaatcaggaagtaaagcatttgcgttcaataacggcacatggacat
cgtacagatgttcgagctatctgttttagttccgataatttggcatttgctaccgctagc
ggagattctgtcaaattatggaatagaccaacattatcatctttacgcacagtgcagtgt
ggttatgcactgacgataacattcgtgccaggtgacaggcatttaattgttggtttaaag
gatggaaaaatgcttattattgacatttcatctggtgatatcttggaagaaatatcggca
cattccaaagagctttcgagcataacattatttcccgacttgaaaggagttgccagcggt
ggtggtgatcaaacggtgaaattttggaattttgaacttattcaagattctgacaatcag
ataaaagctaaagttctttctgtcttgcacgtaagaacgcttaagctcgaagaaagtgta
ctgtgtgtaagaataagtccgaataatagatttttagctgtttctctattgaactctacc
attaaaatcttcttcttggatacatttaagttctttctgtcgctttatggacacgagcta
ccagtactatgcatggatatatctagcgactccacactcatagcaaccggttctcaagat
cgtaatatcaagatctggggtttggattacggcgattgtcgcaggtccatatttgcgcat
gatgattctgttacaggtctttcattcgtgcctggaactcattatttctttacttctggt
aaagacggcaaaattaaacaatgggacgccgacatatataaaaaaatcatcacattacaa
agtcattttggagaaagttggaattgttgcgtttcaccaaacggggcttacgttgcatca
tgtggttccgatggagtagttagattgtatgagaagactcgcgaacccttagtattacaa
gacgtagcagaagaagaaagagaacaacaagaaaatgaattaattactggggaaagtact
gcagtattaggacagaagcaacaagcattaccttctaaaaagactgttagcagtgagaag
gccgctgaattgatattggaatgcttggaaatatccaatcaatatgagacagaattgagt
aaaactattcctactgacaaagcaccacctcttcccctgctgatgcaggcttacaattgt
acgaacacggaagacttcttattggaaatttttaaacgagttagggcaagtgaattggag
gagacattattattattaccattttctgctgcctgtgatattcttcagagacttcctaat
ttgttaaaaaataattatcataccgagttattagccagattagctctttgcttaatacaa
gcacatcatggtcctatagtggccaatcaaaatcttttgcctacgttggaaattgtgaag
aaactcgctgtagaaaaaatttctgttttaagagatactattggccttaatttgcatggt
atgatgtatttgcaacgcatttttgaggaacaagaaggaataaaattcttcagagacgcc
actaagaatattgaacataagaagaaaatcagaagaaataaggagaaggctataaaaaga
gcaatcatgaatttgtag
DBGET
integrated database retrieval system
