Acromyrmex echinatior (Panamanian leafcutter ant): 105152415
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Entry
105152415 CDS
T03917
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03013
Nucleocytoplasmic transport
aec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105152415
03015 mRNA surveillance pathway
105152415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aec03019
]
105152415
Messenger RNA biogenesis [BR:
aec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105152415
mRNA cycle factors
P-body specific factors
105152415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
105152415
NCBI-ProteinID:
XP_011064998
UniProt:
F4X3S5
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MSENANEAASAEKETTAEEPDAVSEKDRQFLTEYVRETEQRLAMKEEIRMANLNPARPPD
ASFSKLDSSLKKNTTFVKKLKNFSMAQLDTVLKDMATLNLTKYVSEVATALVDAKIKMID
VAPAIRVCSFLHQTYAEFSTHFFENWQRILSLKVGDKITNPSKLRVDLRFYAELVNAGIF
THKQGLPLLGSVLTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPKKVRELSEKLNISI
PKSKMLSPDKQQNVKLLLREYYNSLCKHMLKEHKELQAFEKQNRKILQTRGELSSERKEK
LEALQVCYERLLTNVQSFSDTLDEPMPELPVDNEIKAEVEETLKMINEGEDNAMLEDMWG
DEETRRFYEVFPDLTVFLPGSYLKDTPKDIPKTDTAITEDALDEEIVFDELEETEKVEEL
PEVEVEEPQISNTSNKILLDAFLTHLPNCVNREMIDNAAVNFLMNLNTKHNKKKLVKALF
GVSRIRQDLLPFYSRLAAILYPVMPEIGNDLCQMLKQDFKYHVRKKDQINIESKIKVVRY
IGELVKFKLYSKIEALYCLKVLLHDFTHHHIEMACNLLEICGRYLFCSPDSHQRTKVYLE
QMMRKKAVTALDSRYVTIIENAYYFVNPPESTGGVTKKDRPPVHEFIRKLLYQDLSKTNT
DKVLKWMRKLDWEDESVSSYAIKCLTAAYNVKYPNIRCVGSLLAGLVAHYETIGPQVVDG
VLEDIRLCMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVSVDHSLQ
SVLDPPDHLFRIRLVCTLLETCGQYFSGGSSKKKLDYFLVFFQNYFWFKYTDPIWTSENP
FPVGIDYMYRDTLTMLRPKMQLFQNYKEAQCAVEELRNTLYPTLGNPPVDDTTPEGENDM
GVILEGDEETALVGNGSGDAKGMAELHFEESEDCSEAQSEEEWTADAERDDTMGTQENTQ
GDRSQSLSADGGTEGVIVDVTEELNAALPSGPRRVSCPEDDDFLSALDKMVSDNIQDRMR
DSVKPQQVDISVPLHVKSTKKTYEQLQERPTDNSTVDFVLMLRKGNKQQYKNLAVPVSSE
LAMNLRNREQEQKEEKERVKRLTLNITERQEEEDYQETMNQSTRPVTVNLNRERRQKYNH
PKGAPDADLIFGPKKIR
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaacgcgaacgaagcggcatcggctgagaaagagactaccgcggaagaaccg
gatgcggtctcggaaaaggaccggcagttcttgactgagtatgtgcgagaaacagaacag
agactcgcaatgaaggaagagattcgcatggccaatctcaatcctgcaaggcccccagat
gcatcattcagtaaacttgactcaagcctcaagaaaaatactacatttgtcaagaaactg
aagaactttagcatggctcaactcgacacagttttgaaagatatggcgactttaaatctg
accaaatatgtgagcgaagttgccactgctctagtagatgctaaaataaaaatgattgac
gtagcacctgctattagggtatgtagttttctccatcagacgtacgccgaattttctact
catttttttgaaaattggcaaaggatactgtcactgaaggttggcgacaagataacaaat
cctagtaagctgagagtagatttgcgattctatgcagaattggtaaatgctggaatattt
acacataagcagggcttgccactacttggctcggtactaaccgtattgatcaatatggac
aaagaggagcataataatgctagcataatattgagtttttgtcgacattgtggcgaagat
tacgctggtcttgtacctaaaaaggtacgagagttatccgagaaattgaacatttcaatt
ccaaagagtaaaatgttatcaccggacaagcagcagaatgtcaagctgttgttacgggag
tattacaactccttgtgtaagcatatgttgaaagagcacaaggaactgcaggcattcgag
aaacaaaatcgcaaaatactgcagactaggggagaactgagttcggaacgaaaggaaaaa
cttgaagctttacaagtctgttatgagcgtctattaaccaatgtgcagagcttttccgat
acgctagatgaaccgatgccggagcttccagtggacaatgaaataaaggcagaagtggag
gaaacactgaagatgatcaatgagggagaagataacgctatgttggaggatatgtggggt
gacgaagagacaagacgtttttatgaggtgttcccggatttgactgtttttttaccaggt
tcgtatttgaaggacaccccgaaagatatcccaaagacggacacggcaataacggaagat
gctctcgatgaagaaattgtctttgacgagttagaagaaactgagaaggtcgaagagcta
cctgaggtagaagttgaggagcctcagatttccaacacgagtaacaagatactgctggat
gcttttctgacgcatctgccaaattgtgtaaatcgcgaaatgattgacaatgctgcagtc
aacttcctgatgaatctcaacacaaagcacaacaagaagaagctggtaaaagctcttttc
ggcgtttctagaatccgtcaggatttactacccttttattctcgcttagcagccattctt
tatccagtaatgccagagattggcaacgacttgtgtcagatgttgaaacaagattttaaa
taccatgttcgtaagaaggatcagatcaatattgaatcgaaaatcaaagtggtccgctat
atcggtgaactcgtcaagtttaaactttactccaaaatagaagcattgtattgtctgaag
gttttactacacgattttacgcatcatcacattgaaatggcttgcaacttgttagagatt
tgcggtcgatatctcttctgttcgccggattctcatcaaaggaccaaggtctatctggag
caaatgatgcgcaaaaaagcagttactgcacttgattcgcgctacgtcacgattatcgag
aacgcgtactacttcgtgaatccacccgaatcgaccggcggcgttacaaagaaggacaga
ccgcccgtacatgaatttattagaaaactactttatcaggatctctccaagacgaatact
gacaaagtgctcaaatggatgcgcaaacttgactgggaggacgagagcgtatcatcctat
gctataaaatgtctcactgccgcctacaatgttaaatatcccaatattcgatgcgtggga
agcctcttagccggcttggtagcccattatgaaacgatcgggccacaagtggtcgacggt
gtactcgaagatatacgactgtgcatggaaatcaacctgcccaaattcaatcaacgacgc
attgctatggtcaagtacttgggtgagctatacaactatcgaatggtggaaagcggcgat
attttccgtactttgtatttgcttattacttttggcgtcagtgtggaccattcgttgcaa
agtgtgctcgatccgcctgatcatctctttcgcattcgtctagtgtgcacattattggag
acttgtggccagtacttcagcggcggatcaagcaagaagaaactcgattattttctcgta
ttcttccaaaactacttctggtttaagtatacggatccgatctggacgtctgagaatccg
ttccccgttgggatagattacatgtatcgtgacacattaacgatgctacgacccaaaatg
caattattccagaattacaaggaagcgcaatgcgccgtagaagaattacgcaacaccctc
tatccaaccttgggtaatcctccagttgatgatactactcccgaaggcgaaaacgacatg
ggcgttatcctggaaggcgatgaagaaacagcattggtcggaaacggtagcggagatgcc
aaaggtatggctgaattgcatttcgaagaatccgaagattgttcggaagcgcagtcggaa
gaggaatggacagccgatgcagaacgagacgacactatgggcacccaagaaaacactcag
ggtgaccgatctcagagtctgtcggcagacggtggcactgaaggcgtaattgtagacgtg
acagaggaattgaatgcagctttaccgtctggaccacgacgggtgagctgtccggaggac
gatgatttcctgtcggcgctggataaaatggtctcagacaacatacaggatcgcatgcga
gattcggtaaaaccacaacaagtggatatctccgtgccattacacgtgaagagtacaaag
aagacatacgaacaactgcaagagagaccaaccgacaatagcacagtggactttgtgctg
atgctgaggaagggtaacaaacaacagtacaagaatctcgcagttccggtgtcatctgag
ttggctatgaatctcagaaatcgcgaacaggaacaaaaagaggagaaagagcgtgtgaag
agactaactttaaacattactgagaggcaagaggaggaagattatcaagaaactatgaat
caaagtacgagaccagtcaccgtaaacttgaatagggaacgacgacaaaaatataatcac
cctaaaggagcacccgatgccgatctcatctttgggccgaaaaaaattcgataa
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