Acromyrmex echinatior (Panamanian leafcutter ant): 105152855
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Entry
105152855 CDS
T03917
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Pathway
aec03022
Basal transcription factors
aec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105152855
09124 Replication and repair
03420 Nucleotide excision repair
105152855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aec03021
]
105152855
03400 DNA repair and recombination proteins [BR:
aec03400
]
105152855
Transcription machinery [BR:
aec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105152855
DNA repair and recombination proteins [BR:
aec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105152855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
105152855
NCBI-ProteinID:
XP_011065668
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MHRDQSRTIANISRSVIFLPFPFSTFLILSPNPPRFVSTYPERGFSRIMAEEEFEEKEYR
WETGYEKTWEAIKEDDHGLLEASVADIIHNAKRKRQLERKQGARLGMMRHLYIILDASES
MSNQDLKPTRFLCSLKLLEDFIEEFFYQNPISQLGVIITRNKRAEKISDLAGNSKKHIKE
LQILQQTVVGGEPSLQNSLELATKLLKLLPSHASKEILVIIGALTTCDPGDINETIRNMK
LDSIRCSVIGLAAELYICKRMANITGGEHSVALDDKHYKEQLNAHIDPPPAATRLDAALV
KMGFPHHALHSNAPDTSITVCMCHAHNSDETVKFMTTGYLCPQCISKHCELPVECRACGL
TLVSAPHLARSYHYLFPVDPFKEIAPDSDYTICFGCQKAFAQKDKKVYACGKCNQMFCLD
CEIFIHEILHTCPGCAINPETYKKRESTDRS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcgatcaatcgcgaacaatcgcgaatatatcgcgatccgtaatcttcctgccc
tttcctttctcaacttttctcattctttccccaaacccaccacgatttgtctcgacctat
ccggagcggggattttcgcggataatggcagaagaagaatttgaggaaaaggagtaccgt
tgggaaactggttacgaaaaaacatgggaagcaattaaggaagatgaccatggtctgttg
gaagcctctgtcgcagatattattcataatgccaagagaaaacgtcagttggaaagaaaa
cagggtgccagattaggaatgatgaggcatctttatatcatcttagatgcttcggaatca
atgtctaatcaagatttgaaaccaactcgttttctgtgttctctaaagcttctagaagat
tttatcgaagaatttttctatcaaaatcctataagtcaattaggtgtaattataactaga
aataaaagggctgagaaaattagcgatttggctggtaactcaaagaagcacattaaggaa
ttgcaaattttgcaacaaactgtagtaggcggtgagccttctttgcaaaattctttagaa
ttggcaacaaagttattgaaattattaccgtcgcacgctagtaaagaaatattggtaatt
ataggagctttgactacatgcgaccctggagatatcaacgaaacaataagaaatatgaaa
ttggacagtattagatgtagcgtaataggattggccgctgaattatacatctgtaaacga
atggcaaatattaccggtggcgaacatagcgttgcgctcgatgataaacattacaaggag
caattgaatgcacatatagatcctccgcctgctgcaacgcgattagatgcagcgcttgtg
aaaatgggatttcctcatcacgctctacactctaacgcaccagatacatctataacagta
tgtatgtgccacgcacacaattctgatgaaacagttaaatttatgactaccggctacctt
tgtccccagtgcatcagtaaacattgtgagctacctgtggaatgtagagcttgcggtctt
actctagtatccgctccacatttagcccgatcatatcactatctatttcctgttgatcct
tttaaagaaattgcacctgatagtgattatactatctgctttggttgccaaaaagctttt
gctcaaaaggataaaaaggtatatgcctgtggaaaatgtaatcaaatgttttgtttagac
tgtgagatttttattcatgagatattgcacacgtgtcctggttgtgcaataaatcccgaa
acatataaaaaaagagagtctacagatagatcatga
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integrated database retrieval system
