Acromyrmex echinatior (Panamanian leafcutter ant): 105152899
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Entry
105152899 CDS
T03917
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
aec
Acromyrmex echinatior (Panamanian leafcutter ant)
Brite
KEGG Orthology (KO) [BR:
aec00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aec04147
]
105152899
00535 Proteoglycans [BR:
aec00535
]
105152899
00536 Glycosaminoglycan binding proteins [BR:
aec00536
]
105152899
Exosome [BR:
aec04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105152899
Proteoglycans [BR:
aec00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105152899
Glycosaminoglycan binding proteins [BR:
aec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105152899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
HcyBio
Motif
Other DBs
NCBI-GeneID:
105152899
NCBI-ProteinID:
XP_011065749
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MPLRSLLVISAALCAMCSRADFFSGKEVVYDLMEASVSSMTDDNNLYMDDGVDGFPAFGF
RPGSEVKQPYRLYLPEKLPAEFTLVATFKPTSFRTSYLFAVLNPFETVVQLGIRISDGPG
SNQNVSLVYTNSDEHSHSEEVTKFTVPKLTKKWSKIVIKVSTSDVILYLNCHEMARQKVT
RIPQELVFDTASTLYIAQAGPHIQERYDGLLQSLKLYAGHPSDLVKCTADFDFSADEEFA
SGDYDVSLIDGSGDAEYLNKIGRDADEDKSEESNPPPFITPPPPNPDYKGPKGEKGDKGD
KGESVRGPPGPPGPPGRDEDWLMKIPQGPPGQKGDPGTCTCNATALMSSFTMPKMIQGPK
GEPGVPGQEGKQGLMGLTGAAGPPGERGLHGPSGAKGDKGDIGITGPEGSQGQKGEPGRD
GISGEKGAQGPPGPPGKGEFSGYDPSWKPRNIYRPEGITMRPGLPGQKGEPGISGNPGPK
GEAGIPGSKGIKGEPGYKGIKGDHGKDGPRGIQGFKGEPGAPGAPGLPGAPGENGRPAEK
GDKGDTGPEGKLGPPGPPGPPGVSGSGGINVGDLGFGTKGDKGDSGARGYKGDKGTKGEK
GNKGDAGPAGIPGINGIQGPQGDKGEPGKDGVSGLPGIPGAKGERGERGPPGATTVANSG
DYITIKGEKGAEGKRGRRGRPGPPGPVGPPGKPGNTGEIGLPGWMNSMKGRPGTPGIPGS
IGPMGPKGEKGEPGAPSPYGVSVGIKGDKGDDGFPGIPGQPGREGQKGPPGPPGPPGIPS
KGNYYPVPGPPGPPGPPGPPGLSLIGQKGEPGIGRSHVFGERDYYPPRQGARSSLDELKA
LRELKQLKELKEQLGVVTTATRGPLESTTKIVPGAVTFQNTEAMTKMSGVSPVGTLAYII
DEQALLVRVNNGWQYIALGSLLPITTPAPPTTSPPPANPPFEASNLINQIPVKADGTGWY
PRMLRMAALNEPFTGDMHGIRGADYACYRQARRAGLRGTFRAFLSSRVQNVDSIVRLGDR
DLPIVNIKGDVLFNSWKEMFNGNGAYFSQNPRIYSFNGKNILTDFAWPEKVAWHGSHKLG
DRAMDTYCDAWHSSSSDRYGLGSPLTGGRLLEQVRYSCDNKFALLCIEVTSELVRRRRKS
TWRSSCNTEYSHLRPSFRNAKIESLCK
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttaggtcgttactggtgatctccgctgcgctatgcgcgatgtgcagccgtgct
gacttcttcagcgggaaggaagtggtatacgatttgatggaggcatcggtgtcatcgatg
acggatgataataatctttacatggatgacggcgtcgacggatttccggcatttggcttt
cgacccggatccgaagtgaagcaaccctacaggctatatctcccggaaaagttgccagcc
gagttcaccctggtggccacgttcaagccgacctctttcagaacgagctacctcttcgcc
gttcttaatcccttcgaaaccgttgtccaattgggcattagaatttcggatggaccaggc
tcgaaccagaatgtttcattggtctacacgaattcagatgagcattcgcattcggaggag
gtgacaaaatttactgtgccaaagcttacaaagaaatggtcgaagattgtcattaaggtt
tccacgagcgacgtcatcttatatctcaattgccacgagatggcccgacaaaaggttacc
agaatccctcaggaattagtattcgataccgccagcactctgtacatcgcacaagccgga
ccgcacatccaggagcgatatgacggtctactgcaatctttgaagttgtacgccggtcat
ccttcggaccttgtaaagtgcactgctgattttgacttttcagcagatgaagagttcgct
tctggtgattacgatgtcagtttaatcgacggttccggcgatgctgaatacttaaataag
atcggtcgagatgcggacgaagacaaaagcgaggaaagtaacccgccgccattcatcacg
cccccacctccaaatccagattataaaggtccgaaaggtgaaaagggtgacaaaggggac
aagggcgagagcgtcaggggtcctccaggacctcctggtccgcctggtcgcgacgaggat
tggctaatgaagataccacagggaccacctggtcagaagggagaccccggtacttgcacc
tgcaacgccacggccttaatgtcttcctttacgatgccaaagatgatacaagggccaaag
ggcgagccaggagtacccggacaagagggcaagcagggcttaatgggtctcacgggtgcg
gcaggaccgccaggggaaagaggactgcatggtccatctggggctaaaggtgacaagggt
gatattggaataacgggaccggaaggttctcaaggtcaaaagggcgagccgggtcgagat
ggaatatccggtgaaaagggtgcacaaggtccaccggggccacctggaaaaggggaattt
tctggctatgaccctagttggaaacctcgaaatatttacagaccggaaggtatcacaatg
agaccaggacttcccggacaaaagggtgagccaggcatttcaggaaatcccggtcctaaa
ggcgaagctggaatacccggatccaaaggcatcaaaggcgaacctggatacaaaggtatt
aagggcgatcatggaaaagatggtcccagaggaattcagggtttcaaaggtgaacctggt
gcacccggtgcacctggattacccggcgcacctggagaaaacgggcgaccggcagaaaaa
ggtgataagggcgatacaggacctgaaggaaaactgggacctccaggaccacccggtcca
cctggtgtgagcggttccggtggtataaacgtgggagatctaggatttggcacaaaaggg
gacaagggcgatagtggagcgcgcggatacaagggcgataagggcacaaagggtgagaaa
ggcaataagggtgacgccgggccagctggtattcctggaataaacggtattcaagggcct
caaggagataaaggcgagccgggtaaagacggagtatcaggattacccggcatacctggc
gctaaaggcgaaagaggtgagagaggtcctcctggagccactaccgtcgccaattccgga
gactatatcaccatcaagggtgagaaaggcgccgaaggaaaacggggtagaagaggacgg
cctggaccgcctggtcccgtgggtcctcccggaaagccaggaaatacgggagaaatcggt
ctaccaggatggatgaactcgatgaagggtcgtcctgggactcctggaattccaggaagt
atcggaccaatgggacccaagggagaaaaaggggaacctggcgcaccgagtccttacggt
gtttctgtcggtatcaaaggcgacaaaggagacgacggttttcccggaattcctggacag
ccgggaagagagggccaaaaaggacctccaggacctcccggacctcctggaataccatct
aaaggaaactattatccagttccaggacctccgggtcctcccggacctcctggtccgccc
ggcttgtctttaatcggacagaaaggagaacccgggatcggtagaagtcacgttttcgga
gaaagagattactatccccctaggcaaggagccagaagtagtctagacgaattgaaagct
ctacgtgaactcaagcaactgaaagaactgaaagagcaattaggtgttgttactaccgct
acaaggggacctttagaaagtacaacgaaaattgtgccaggagctgttacgttccaaaac
acagaagccatgacaaaaatgtctggtgttagtccagttgggactctggcttacatcata
gacgaacaagctttactagtcagagttaataatggatggcaatacattgcactcgggtca
cttttgcctatcacaacgccagcaccaccaacgacatcaccaccgccagcaaaccctcct
tttgaagcatctaacttaattaaccaaatacccgtgaaagctgacggaacagggtggtat
ccgcggatgttgaggatggctgcgttaaatgaaccattcaccggagatatgcacggtata
cgaggagcagactacgcttgttatcgacaagcaaggcgagcaggcttaagaggtaccttc
cgcgcttttcttagctctcgagttcaaaatgtcgatagcattgtcagattaggagatcga
gatcttcccatagttaacataaagggcgacgtgctattcaactcttggaaagagatgttc
aatggaaatggggcgtacttctctcagaatcccagaatctacagcttcaatggaaagaac
atccttactgactttgcgtggcccgagaaagttgcgtggcacggttctcataaactcggc
gaccgagccatggacacttactgcgacgcctggcattcgagcagctcggatcgttatgga
ctaggctcgccgttgaccggcggtcgattgttagaacaagtacgatactcgtgcgacaat
aaattcgcgctgctctgcatcgaggtgacgagcgagctggtgagaagaagacggaagagt
acttggaggagttcatgcaatactgaatactcgcaccttcgaccatcctttcgcaacgcg
aaaatcgaatcgttatgtaaatag
DBGET
integrated database retrieval system
